forked from Project-MONAI/project-monai.github.io
-
Notifications
You must be signed in to change notification settings - Fork 0
/
about.html
728 lines (697 loc) · 38.8 KB
/
about.html
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
<!DOCTYPE html>
<html lang="en" style="scroll-behavior: smooth;">
<head>
<!-- Global site tag (gtag.js) - Google Analytics -->
<script async src="https://www.googletagmanager.com/gtag/js?id=G-QVGBCPFPJ6"></script>
<script>
window.dataLayer = window.dataLayer || [];
function gtag() {
dataLayer.push(arguments);
}
gtag('js', new Date());
gtag('config', 'G-QVGBCPFPJ6');
</script>
<!-- Required meta tags -->
<meta charset="utf-8">
<meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no">
<meta name="description" content="Project MONAI was originally started by NVIDIA & King’s College London to establish an inclusive community of AI researchers for the development and exchange of best practices for AI in healthcare imaging across academia and enterprise researchers.">
<!--====== Favicon Icon ======-->
<link rel="shortcut icon" href="assets/img/favicon.png" type="image/png">
<title>MONAI - About Us</title>
<!-- Animate -->
<link rel="stylesheet" type="text/css" href="assets/css/animate.css">
<!-- Tailwind css -->
<link rel="stylesheet" type="text/css" href="assets/css/tailwind.css">
</head>
<body>
<!-- Header Area wrapper Starts -->
<header id="header-wrap" class="relative border-b border-neutral-neutral_gray2">
<!-- Navbar Start -->
<div class="navigation top-0 left-0 w-full z-30 duration-300">
<div class="container">
<nav class="navbar navbar-expand-lg flex justify-end items-center justify-between relative duration-300" x-data="{ one: false, two: false, three: false }">
<a class="navbar-brand" href="index.html">
<img class="py-2" src="assets/img/MONAI-logo_color.png" alt="Logo">
</a>
<button class="navbar-toggler focus:outline-none block lg:hidden" type="button">
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="w-5 h-5"
>
<line x1="3" y1="12" x2="21" y2="12"></line>
<line x1="3" y1="6" x2="21" y2="6"></line>
<line x1="3" y1="18" x2="21" y2="18"></line>
</svg>
</button>
<div class="collapse navbar-collapse hidden lg:block duration-300 shadow absolute top-100 left-0 mt-full bg-white z-20 px-5 w-full lg:static lg:bg-transparent lg:shadow-none">
<ul class="navbar-nav mr-auto justify-end items-center lg:flex">
<li class="nav-item relative">
<a class="page-scroll" href="index.html">Home</a>
</li>
<li class="nav-item relative">
<button class="page-scroll" @click="one = true">Frameworks <span class="chevron"></span></button>
<div class="absolute w-52 top-0 z-50 w-screen max-w-xs p-2 mx-0 my-12 text-gray-800 border-2 border-brand-light transform bg-white rounded shadow lg:left-1/2 lg:-translate-x-1/2" x-show.transition.in.opacity.out.opacity="one" @click.away="one = false"
x-cloak>
<div class="flex flex-col space-y-1 font-medium text-gray-800">
<a href="label.html" class="px-3 py-2 transition rounded hover:bg-gray-200 hover:text-primary"> MONAI Label </a>
<a href="core.html" class="px-3 py-2 transition rounded hover:bg-gray-200 hover:text-primary"> MONAI Core</a>
<a href="deploy.html" class="px-3 py-2 transition rounded hover:bg-gray-200 hover:text-primary"> MONAI Deploy </a>
</div>
</div>
</li>
<li class="nav-item relative">
<button class="page-scroll" @click="two = true">Docs <span class="chevron"></span></button>
<div class="absolute w-52 top-0 z-50 w-screen max-w-xs p-2 mx-0 my-12 text-gray-800 border-2 border-brand-light transform bg-white rounded shadow lg:left-1/2 lg:-translate-x-1/2" x-show.transition.in.opacity.out.opacity="two" @click.away="two = false"
x-cloak>
<div class="flex flex-col space-y-1 font-medium text-gray-800">
<a href="https://docs.monai.io/projects/label/en/latest/index.html" target="_blank" class="px-3 py-2 transition rounded hover:bg-gray-200 hover:text-primary"> MONAI Label Docs</a>
<a href="https://docs.monai.io/en/stable/" target="_blank" class="px-3 py-2 transition rounded hover:bg-gray-200 hover:text-primary"> MONAI Core Docs</a>
<a href="https://docs.monai.io/projects/monai-deploy-app-sdk/en/latest/" target="_blank" class="px-3 py-2 transition rounded hover:bg-gray-200 hover:text-primary"> MONAI Deploy Docs </a>
</div>
</div>
</li>
<li class="nav-item relative">
<button class="page-scroll" @click="three = true">Resources <span class="chevron"></span></button>
<div class="absolute w-52 top-0 z-50 w-screen max-w-xs p-2 mx-0 my-12 text-gray-800 border-2 border-brand-light transform bg-white rounded shadow lg:left-1/2 lg:-translate-x-1/2" x-show.transition.in.opacity.out.opacity="three" @click.away="three = false"
x-cloak>
<div class="flex flex-col space-y-1 font-medium text-gray-800">
<a href="about.html" class="px-3 py-2 transition rounded hover:bg-gray-200 hover:text-primary active">About Us</a>
<a href="started.html" class="px-3 py-2 transition rounded hover:bg-gray-200 hover:text-primary">Getting Started</a>
<a href="community.html" class="px-3 py-2 transition rounded hover:bg-gray-200 hover:text-primary">Community</a>
<a href="https://medium.com/@monai" target="_blank" class="px-3 py-2 transition rounded hover:bg-gray-200 hover:text-primary">Blog</a>
</div>
</div>
</li>
<li class="nav-item relative">
<a class="page-scroll" href="model-zoo.html">Model Zoo</a>
</li>
<li class="nav-item relative">
<a class="page-scroll" target="_blank" href="https://github.com/Project-MONAI">GitHub</a>
</li>
</ul>
</div>
</nav>
</div>
</div>
<!-- Navbar End -->
</header>
<!-- Header Area wrapper End -->
<!-- Contributors Section Start -->
<section id="contributors" class="py-16">
<div class="container">
<div class="flex flex-wrap items-center">
<div class="w-full lg:w-1/2">
<h2 class="mb-6 section-heading">About MONAI</h2>
<div class="w-full sm:3/5">
<p class="py-2">Project MONAI was originally started by NVIDIA and King’s College London to establish an inclusive community of AI researchers for the development and exchange of best practices for AI in healthcare imaging across academia and enterprise
researchers.
</p>
<p class="py-2">MONAI Core is the flagship framework created by Project MONAI and it wouldn’t have been possible to accelerate this development without the development of existing toolkits such as Nvidia Clara Train, NiftyNet, DLTK, and DeepNeuro.</p>
</div>
</div>
<div class="flex justify-center w-full lg:w-1/2">
<img class="hidden lg:block lg:w-3/4 xl:auto" src="assets/img/about_us_header.png">
</div>
</div>
</div>
</div>
</section>
<!-- Contributors Section End -->
<!-- Contributors Section Start -->
<section id="contributors" class="py-16 bg-neutral-lightgray">
<div class="container">
<h2 class="section-heading">Advisory Board</h2>
<p class="w-3/4">
Helping guide MONAI's vision and mission, an Advisory Board and nine working groups, have been created and are led by thought leaders throughout the medical research community. These focused working groups allow leaders in those fields to concentrate
their efforts and bring the most impactful contributions to the community. These working groups are open for anyone to attend and contribute.</p>
<div class="grid grid-cols-2 sm:grid-cols-3 lg:grid-cols-4 gap-x-12 gap-y-6 justify-items-center pt-16">
<div class="col-span-1 w-full">
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/SA.png">
</div>
<p class="font-bold my-2">Stephen Aylward</p>
<p class="my-2">Chair of Advisory Board</p>
<a href="https://www.kitware.com/stephen-aylward/" target="_blank">
<p class="my-2 external-link">Profile</p>
</a>
</div>
<div class="col-span-1 w-full">
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/SO.png">
</div>
<p class="font-bold my-2">Sebastien Ourselin</p>
<a href="https://www.kcl.ac.uk/people/sebastien-ourselin" target="_blank">
<p class="my-2 external-link">Profile</p>
</a>
</div>
<div class="col-span-1 w-full">
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/KMH.jpg">
</div>
<p class="font-bold my-2">Klaus Maier-Hein</p>
<a href="https://www.dkfz.de/en/mic/team/people/Klaus_Maier-Hein.html" target="_blank">
<p class="my-2 external-link">Profile</p>
</a>
</div>
<div class="col-span-1 w-full">
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/JK.jpg">
</div>
<p class="font-bold my-2">Jayashree Kalpathy-Cramer</p>
<a href="https://www.nmr.mgh.harvard.edu/user/8165" target="_blank">
<p class="my-2 external-link">Profile</p>
</a>
</div>
<div class="col-span-1 w-full">
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/JC.png">
</div>
<p class="font-bold my-2">Jorge Cardoso</p>
<a href="https://www.kcl.ac.uk/people/jorge-cardoso" target="_blank">
<p class="my-2 external-link">Profile</p>
</a>
</div>
<div class="col-span-1 w-full">
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/DR.png">
</div>
<p class="font-bold my-2">Daniel Rubin</p>
<a href="https://profiles.stanford.edu/daniel-rubin" target="_blank">
<p class="my-2 external-link">Profile</p>
</a>
</div>
<div class="col-span-1 w-full">
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/KZ.png">
</div>
<p class="font-bold my-2">Kevin Zhou</p>
<a href="https://www.linkedin.com/in/s-kevin-zhou-231a094b" target="_blank">
<p class="my-2 external-link">Profile</p>
</a>
</div>
<div class="col-span-1 w-full">
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/NN.png">
</div>
<p class="font-bold my-2">Nassir Navab</p>
<a href="https://www.cs.jhu.edu/faculty/nassir-navab/" target="_blank">
<p class="my-2 external-link">Profile</p>
</a>
</div>
<div class="col-span-1 w-full">
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/AF.jpeg">
</div>
<p class="font-bold my-2">Andrew Feng</p>
<a href="https://www.linkedin.com/in/afeng/" target="_blank">
<p class="my-2 external-link">Profile</p>
</a>
</div>
<div class="col-span-1 w-full">
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/NasirRajpoot.png">
</div>
<p class="font-bold my-2">Nasir Rajpoot</p>
<a href="https://warwick.ac.uk/fac/sci/dcs/people/nasir_rajpoot/" target="_blank">
<p class="my-2 external-link">Profile</p>
</a>
</div>
<div class="col-span-1 w-full">
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/JustinKirby.png">
</div>
<p class="font-bold my-2">Justin Kirby</p>
<a href="https://www.linkedin.com/in/justinkirby82/" target="_blank">
<p class="my-2 external-link">Profile</p>
</a>
</div>
<div class="col-span-1 w-full">
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/KeyvanFarahani.jpg">
</div>
<p class="font-bold my-2">Keyvan Farahani</p>
<a href="https://datascience.cancer.gov/about/staff-directory/keyvan-farahani" target="_blank">
<p class="my-2 external-link">Profile</p>
</a>
</div>
</div>
</div>
</section>
<!-- Contributors Section End -->
<!-- Step-wise break Section Start -->
<section class='h-20 grid grid-cols-2'>
<div class='h-full bg-neutral-lightgray'></div>
<div class='h-full'></div>
</section>
<!-- Step-wise break Section End -->
<section>
<div class="container py-16">
<h2 class="section-heading py-8">Working Groups</h2>
<div class="grid grid-cols-5">
<div class="col-span-5 md:col-span-3 row-start-1">
<h2 class="font-bold text-2xl">Imaging I/O</h2>
<p class="py-4 md:pr-20">
The goal of this working group is to define how data is read into and written out from memory in MONAI. Such input and output requires consideration of (a) the research and application workflows in which MONAI will operate, (b) the importance of effectively
utilizing all available data for deep learning development and evaluation, and (c) the critical significance of understanding and preserving the physical space that is represented by a medical image so that its clinical validity is preserved.
The working group has defined three broad sets of requirements for input and output for MONAI: research I/O requirements, reproducible I/O requirements, and clinical I/O requirements.
</p>
</div>
<div class="w-full col-span-5 md:col-span-2 row-start-2 md:row-start-1 justify-self-start md:justify-self-center mt-8">
<p class="font-bold">Group Lead</p>
<div class="grid grid-cols-2 xl:grid-cols-3 gap-x-4 gap-y-8">
<div>
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/SA.png" />
</div>
<div>
<a href="https://www.kitware.com/stephen-aylward/" target="_blank">
<p class="external-link mt-4"> Stephen Alyward </p>
</a>
</div>
</div>
</div>
</div>
</div>
</div>
</section>
<section class="bg-neutral-lightgray">
<div class="container py-16">
<div class="grid grid-cols-5">
<div class="w-full col-span-5 md:col-span-2 row-start-2 md:row-start-1 justify-self-start md:justify-self-center mt-8">
<p class="font-bold">Group Lead</p>
<div class="grid grid-cols-2 xl:grid-cols-3 gap-x-4 gap-y-8">
<div>
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/BG.png" />
</div>
<div>
<a href="https://www.linkedin.com/in/integratorbrad" target="_blank">
<p class="external-link mt-4"> Brad Genereaux </p>
</a>
</div>
</div>
</div>
</div>
<div class="col-span-5 md:col-span-3 row-start-1 md:pl-8">
<h2 class="font-bold w-1/2 text-2xl">Data: Images, Biomarkers, Demographics, Outputs, and Outcomes</h2>
<p class="py-4">
A key part of Project MONAI is the ingestion of data. This working group will focus on defining support for bioinformatics (e.g., images), biomarkers, and metadata (e.g., patient demographics, outcomes). Part of the focus explores the use of ontologies,
various representations of the data, and what is in-scope for MONAI and what is left to other projects to define. Some of the image representations, for example, include data relating to dimensionality, spacing, components/channels, data
orientation, and time (multiple studies/prior exams).
</p>
</div>
</div>
</div>
</section>
<section>
<div class="container py-16">
<div class="grid grid-cols-5">
<div class="col-span-5 md:col-span-3 row-start-1">
<h2 class="font-bold text-2xl">Transformations: Preprocessing, Augmentation, and Companion Algorithms</h2>
<p class="py-4 md:pr-20">
This working group covers the topics related to data preprocessing and augmentation modules for MONAI. In terms of functionality, these include patient-level transforms, such as simulating body habitus variations, aging; spatial geometric transforms,
intensity transforms and acquisition transforms such as simulating medical imaging modalities, artefacts. In terms of technical implementations, these include differentiability, multi-dimensional data representation, lazy evaluation, caching,
reproducibility, etc
</p>
</div>
<div class="w-full col-span-5 md:col-span-2 row-start-2 md:row-start-1 justify-self-start md:justify-self-center mt-8">
<p class="font-bold">Group Lead</p>
<div class="grid grid-cols-2 xl:grid-cols-3 gap-x-4 gap-y-8">
<div>
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/JC.png" />
</div>
<div>
<a href="https://www.kcl.ac.uk/people/jorge-cardoso" target="_blank">
<p class="external-link mt-4"> Jorge Cardoso </p>
</a>
</div>
</div>
</div>
</div>
</div>
</div>
</section>
<section class="bg-neutral-lightgray">
<div class="container py-16">
<div class="grid grid-cols-5">
<div class="w-full col-span-5 md:col-span-2 row-start-2 md:row-start-1 justify-self-start md:justify-self-center mt-8">
<p class="font-bold">Group Lead</p>
<div class="grid grid-cols-2 xl:grid-cols-3 gap-x-4 gap-y-8">
<div>
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/JK.jpg" />
</div>
<div>
<a href="https://www.nmr.mgh.harvard.edu/user/8165" target="_blank">
<p class="external-link mt-4"> Jayashree Kalpathy-Cramer</p>
</a>
</div>
</div>
<div>
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/DR.png" />
</div>
<div>
<a href="https://profiles.stanford.edu/daniel-rubin" target="_blank">
<p class="external-link mt-4"> Daniel Rubin </p>
</a>
</div>
</div>
<div>
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/HolgerRoth.jpg" />
</div>
<div>
<a href="https://research.nvidia.com/person/holger-roth" target="_blank">
<p class="external-link mt-4"> Holger Roth </p>
</a>
</div>
</div>
</div>
</div>
<div class="col-span-5 md:col-span-3 row-start-1 md:pl-8">
<h2 class="font-bold w-1/2 text-2xl">Federated Learning and Applications</h2>
<p class="py-4">
Federated learning is emerging as a promising approach for training AI models without requiring sites to share data. This is particularly important in medical use cases, since there are privacy and regulatory restrictions to sharing data. A number of
different methods are being developed for federated learning, and they are currently silo efforts with limited synergy. The goal of this effort is to unify the disparate methods of federated learning in a common MONAI framework. This will
be pursued through implemented federated learning use cases in MONAI as well as generation of best practices and documentation to enable the community to more broadly participate and implement common and interoperable approaches.
</p>
</div>
</div>
</div>
</section>
<section>
<div class="container py-16">
<div class="grid grid-cols-5">
<div class="col-span-5 md:col-span-3 row-start-1">
<h2 class="font-bold text-2xl">Evaluation, Reproducibility and Benchmarking</h2>
<p class="py-4 md:pr-20">
Every year, hundreds of new algorithms are published in the field of biomedical image analysis. While validation of new methods has long been based on private data, publically available data sets and international competitions (‘challenges’) meanwhile
allow for benchmarking algorithms in a transparent and comparative manner. Recent research, however, has revealed several flaws related to common practice in validation. A core goal of this working group is, therefore, to provide the infrastructure
and tools for quality-controlled validation and benchmarking of medical image analysis methods. In collaboration with the international biomedical image analysis challenges (BIAS) initiative, open technical challenges and research questions
related to a variety of topics will be addressed, ranging from best practices to how to create incentives for sharing code and data to performance aspects and implementation efficiency.
</p>
</div>
<div class="w-full col-span-5 md:col-span-2 row-start-2 md:row-start-1 justify-self-start md:justify-self-center mt-8">
<p class="font-bold">Group Lead</p>
<div class="grid grid-cols-2 xl:grid-cols-3 gap-x-4 gap-y-8">
<div>
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/LM.jpg" />
</div>
<div>
<a href="https://www.dkfz.de/en/cami/team/people/Lena_Maier-Hein.html" target="_blank">
<p class="external-link mt-4"> Lena Maier-Hein </p>
</a>
</div>
</div>
</div>
</div>
</div>
</div>
</section>
<section class="bg-neutral-lightgray">
<div class="container py-16">
<div class="grid grid-cols-5">
<div class="w-full col-span-5 md:col-span-2 row-start-2 md:row-start-1 justify-self-start md:justify-self-center mt-8">
<p class="font-bold">Group Lead</p>
<div class="grid grid-cols-2 xl:grid-cols-3 gap-x-4 gap-y-8">
<div>
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/MB.jpg" />
</div>
<div>
<a href="https://www.dkfz.de/en/mic/team/people/Michael_Baumgartner.html" target="_blank">
<p class="external-link mt-4"> Michael Baumgartner </p>
</a>
</div>
</div>
</div>
</div>
<div class="col-span-5 md:col-span-3 row-start-1 md:pl-8">
<h2 class="font-bold w-1/2 text-2xl">Research</h2>
<p class="py-4">
Establish MONAI as a catalyst for scientific progress and real life impact through the following actions:
</p>
<ul class="list-inside list-disc">
<li>Identify key challenges currently hampering scientific progress and real life impact.</li>
<li>Formalize abstract solutions and determine concepts for implementation in MONAI.</li>
<li>Communicate results in the form of recommendations, best practice guidelines or articles to the MONAI advisory board, fellow MONAI working groups, or the public</li>
</ul>
</div>
</div>
</div>
</section>
<section>
<div class="container py-16">
<div class="grid grid-cols-5">
<div class="col-span-5 md:col-span-3 row-start-1">
<h2 class="font-bold text-2xl">Community Development, Outreach and Adoption</h2>
<p class="py-4 md:pr-20">
This working group focuses on outreach, to establish MONAI as a common software foundation that the Medical Imaging research and development community can build upon. This working group is charged with developing technical training and onboarding content,
including tutorials, technical blogs, bootcamps, hackathons to educate and engage with researchers and developers. Another area of focus for the working group is to define the infrastructure and processes needed to support and grow a transparent,
honest, and open community of MONAI contributors and adopters, including establishing best practices for giving appropriate recognition to those who are promoting and making significant contributions back to MONAI.
</p>
</div>
<div class="w-full col-span-5 md:col-span-2 row-start-2 md:row-start-1 justify-self-start md:justify-self-center mt-8">
<p class="font-bold">Group Lead</p>
<div class="grid grid-cols-2 xl:grid-cols-3 gap-x-4 gap-y-8">
<div>
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/PD.png" />
</div>
<div>
<a href="https://www.linkedin.com/in/prerna-dogra-2664a72a" target="_blank">
<p class="external-link mt-4"> Prerna Dogra </p>
</a>
</div>
</div>
<div>
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/MZ.jpg" />
</div>
<div>
<a href="https://www.linkedin.com/in/michaeljzephyr/" target="_blank">
<p class="external-link mt-4"> Michael Zephyr </p>
</a>
</div>
</div>
</div>
</div>
</div>
</div>
</section>
<section class="bg-neutral-lightgray">
<div class="container py-16">
<div class="grid grid-cols-5">
<div class="w-full col-span-5 md:col-span-2 row-start-2 md:row-start-1 justify-self-start md:justify-self-center mt-8">
<p class="font-bold">Group Lead</p>
<div class="grid grid-cols-2 xl:grid-cols-3 gap-x-4 gap-y-8">
<div>
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/HarisShuaib.jpg" />
</div>
<div>
<a href="https://www.linkedin.com/in/haris-shuaib-91519b55/" target="_blank">
<p class="external-link mt-4"> Haris Shuaib </p>
</a>
</div>
</div>
<div>
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/DavidBericat.jpg" />
</div>
<div>
<a href="https://www.linkedin.com/in/davidbericat/" target="_blank">
<p class="external-link mt-4"> David Bericat</p>
</a>
</div>
</div>
<div>
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/SelnurErdal.jpg" />
</div>
<div>
<a href="https://medicine.osu.edu/find-faculty/clinical/radiology/barbaros-selnur-erdal-phd" target="_blank">
<p class="external-link mt-4"> Selnur Erdal</p>
</a>
</div>
</div>
</div>
</div>
<div class="col-span-5 md:col-span-3 row-start-1 md:pl-8">
<h2 class="font-bold w-1/2 text-2xl">Deploy</h2>
<p class="py-4">
This working group aims to define how to close the existing gap from research and development to clinical production environments by bringing AI models into medical applications and clinical workflows with the end goal of helping improve patient care.
The focus will include defining the open high-level functional architecture and determining which components and standard APIs are required. By collaborating with the MONAI developers, the group will move from requirements to implemented
solutions.
</p>
<p class="py-4">
Following a phased approach, the deploy working group will concentrate on what the end-to-end experience should look like first. Some of these challenges include:
</p>
<ul class="list-inside list-disc">
<li>Packaging trained AI models into medical executable applications</li>
<li>Lightweight inference for local validation</li>
<li>Model orchestration, deployment, serving and inference across multiple compute nodes.</li>
<li>Consume multi-modal data pipelines, starting with medical imaging, DICOM-based first, and patient data coming from EHR next.</li>
</ul>
</div>
</div>
</div>
</section>
<section>
<div class="container py-16">
<div class="grid grid-cols-5">
<div class="col-span-5 md:col-span-3 row-start-1">
<h2 class="font-bold text-2xl">Digital Pathology</h2>
<p class="py-4 md:pr-20">
Digital pathology as an imaging modality is a relatively new field compared to radiology imaging. Digital pathology focuses on Whole-Slide Images (WSIs), which are digital scans of tissue slides at the microscopic resolution, often at 250nm per pixel.
WSIs are different from standard medical images due to their sheer size - a typical pathology image can be of the order of 150K x 100K pixels.
</p>
<p class="py-4 md:pr-20">Recently, there have been significant advances in applying image analysis and machine learning to pathology images, also known as computational pathology. Despite those advances, there exists no standard pipeline for the preprocessing, analysis,
and visualization of pathology images. This lack of standardization leads to a high barrier to entry and a lack of reproducibility for existing methods. This working group will aim to address those challenges around standardization and reproducibility.
</p>
</div>
<div class="w-full col-span-5 md:col-span-2 row-start-2 md:row-start-1 justify-self-start md:justify-self-center mt-8">
<p class="font-bold">Group Lead</p>
<div class="grid grid-cols-2 xl:grid-cols-3 gap-x-4 gap-y-8">
<div>
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/NasirRajpoot.png" />
</div>
<div>
<a href="https://warwick.ac.uk/fac/sci/dcs/people/nasir_rajpoot/" target="_blank">
<p class="external-link mt-4"> Nasir Rajpoot </p>
</a>
</div>
</div>
<div>
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/LC.jpg" />
</div>
<div>
<a href="https://www.feinberg.northwestern.edu/faculty-profiles/az/profile.html?xid=44206" target="_blank">
<p class="external-link mt-4"> Lee A Cooper </p>
</a>
</div>
</div>
</div>
</div>
</div>
</div>
</section>
<section class="bg-neutral-lightgray">
<div class="container py-16">
<div class="grid grid-cols-5">
<div class="w-full col-span-5 md:col-span-2 row-start-2 md:row-start-1 justify-self-start md:justify-self-center mt-8">
<p class="font-bold">Group Lead</p>
<div class="grid grid-cols-2 xl:grid-cols-3 gap-x-4 gap-y-8">
<div>
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/NH.png" />
</div>
<div>
<a href="https://ncigt.org/people/nobuhiko-hata" target="_blank">
<p class="external-link mt-4"> Nobi Hata </p>
</a>
</div>
</div>
<div>
<div class="aspect-h-1 aspect-w-1">
<img class="object-cover shadow-lg rounded-lg" src="assets/img/SA.png" />
</div>
<div>
<a href="https://www.kitware.com/stephen-aylward/" target="_blank">
<p class="external-link mt-4"> Stephen Aylward </p>
</a>
</div>
</div>
</div>
</div>
<div class="col-span-5 md:col-span-3 row-start-1 md:pl-8">
<h2 class="font-bold w-1/2 text-2xl">Stream</h2>
<p class="py-4">
The mission of the MONAI Stream working group is to advance MONAI as a platform for real-time AI research involving the multitude of interfaces, signals, analyses, simulations, and procedures associated with image-guided interventions and point-of-care applications. To fulfill that mission, we are investing in the integration of MONAI with robotic and surgical navigation systems such as ROS, DVRK, OpenIGTLink, and SlicerIGT, to meet the challenges associated with fusing AI with trackers, image acquisition systems, daVinci robots, AR/VR devices, and a multitude of other medical systems. Driving tasks include surgical event recognition, real-time 3D reconstruction from endoscopic video, collaborative camera control, and skill assessment. A major consideration is GPU resource management that supports multiple inference engines running in parallel as well as methods for streaming signals directly to GPU memory.
</p>
</div>
</div>
</div>
</section>
<!-- Footer Section Start -->
<footer id="footer" class="bg-neutral-lightgray py-2 border-t border-neutral-light_gray">
<div class="container">
<div class="flex flex-wrap items-center justify-between">
<div class="w-auto">
<div class="mx-3">
<div class="footer-logo">
<a href="index.html"><img src="assets/img/MONAI-logo_color.png" alt=""></a>
</div>
</div>
</div>
<div class="hidden lg:block w-auto">
<div class="mx-3 text-black">
<ul class="flex justify-between">
<li class="px-4">
<a href="about.html" class="footer-links">About Us</a>
</li>
<li class="px-4">
<a href="started.html" class="footer-links">Get Started</a>
</li>
<li class="px-4">
<a href="community.html" class="footer-links">Community</a>
</li>
<li class="px-4">
<a href="https://medium.com/@monai" class="footer-links">Blog</a>
</li>
<li class="px-4">
<a href="docs.html" class="footer-links">Docs</a>
</li>
<li class="px-4">
<a href="https://github.com/Project-MONAI" class="footer-links">GitHub</a>
</li>
</ul>
</div>
</div>
<div class="w-auto">
<div class="mx-3">
<ul class="social-icons flex justify-end">
<li class="mx-2">
<a href="https://twitter.com/ProjectMONAI">
<i>
<img src="assets/img/twitter_icon_square.png"/>
</i>
</a>
</li>
<li class="mx-2">
<a href="https://medium.com/@monai">
<i>
<img src="assets/img/medium_icon_square.png"/>
</i>
</a>
</li>
<li class="mx-2">
<a href="https://www.youtube.com/c/Project-MONAI">
<i>
<img src="assets/img/youtube_icon_square.png"/>
</i>
</a>
</li>
</ul>
</div>
</div>
</div>
</div>
</footer>
<!-- Footer Section End -->
<!-- Go to Top Link -->
<a href="#" class="back-to-top w-10 h-10 fixed bottom-0 right-0 mb-5 mr-5 flex items-center justify-center rounded-full border border-solid border-brand-dark text-white text-lg z-20">
<i class="transform -rotate-90">
<img src="assets/img/ic_arrow_right.png"/>
</i>
</a>
<!-- All js Here -->
<script src="assets/js/wow.js"></script>
<script src="assets/js/particles.min.js"></script>
<script src="assets/js/main.js"></script>
<script src="https://unpkg.com/[email protected]/dist/cdn.min.js"></script>
</body>
</html>