azure-pipelines.yml

trigger:
  - master

pr:
  autoCancel: true
  branches:
    include:
      - master

jobs:
- job: 'Linux'
  pool:
    vmImage: 'ubuntu-latest'
  timeoutInMinutes: 60

  strategy:
    matrix:
      Python36:
        CONDA_PY: '3.6'
      Python37:
        CONDA_PY: '3.7'
    maxParallel: 10
  
  steps:
  - bash: echo "##vso[task.prependpath]$CONDA/bin"
    displayName: Add conda to PATH

  - bash: sudo install -d -m 0777 /usr/envs
    displayName: Fix conda permissions

  - bash: |
      conda config --set always_yes yes --set changeps1 no
      conda config --add channels conda-forge
      conda create -n test-environment python=$(CONDA_PY) --file requirements-dev.txt
      source activate test-environment
    displayName: Create new conda environment

  - bash: |
      source activate test-environment
      pip install -e .
    displayName: Installing cg_mapping
    
  - bash: |
      source activate test-environment
      python -m pytest -v
    displayName: Running tests
    condition: eq( variables['CONDA_PY'], '3.6' )
  
  - bash: |
      source activate test-environment
      pip install pytest-azurepipelines
      python -m pytest -v  --cov cg_mapping --cov-report=html --no-coverage-upload
      bash <(curl -s https://codecov.io/bash) -C $(Build.SourceVersion)
    displayName: Running tests and calculating coverage
    condition: eq( variables['CONDA_PY'], '3.7' )

  - task: PublishCodeCoverageResults@1
    inputs: 
      codeCoverageTool: Cobertura
      summaryFileLocation: '$(System.DefaultWorkingDirectory)/**/coverage.xml'
      reportDirectory: '$(System.DefaultWorkingDirectory)/**/htmlcov'
    condition: eq( variables['CONDA_PY'], '3.7' )