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Request to troubleshoot bcftools error encountered while installing snippy in macOS Sonoma 14.4.1 #589

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Jeewan-Thapa opened this issue May 16, 2024 · 1 comment

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@Jeewan-Thapa
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Code used:
conda config --add channels bioconda
conda config --add channels conda-forge
conda create --name snippy snippy

Results:
Channels:

  • conda-forge
  • bioconda
  • defaults
    Platform: osx-arm64
    Collecting package metadata (repodata.json): done
    Solving environment: failed

LibMambaUnsatisfiableError: Encountered problems while solving:

  • nothing provides bcftools >=1.8 needed by snippy-4.4.0-0

Could not solve for environment specs
The following packages are incompatible
└─ snippy is not installable because there are no viable options
├─ snippy [4.4.0|4.4.1|4.4.3] would require
│ └─ bcftools >=1.8 , which does not exist (perhaps a missing channel);
├─ snippy [4.4.3|4.4.5] would require
│ └─ bcftools >=1.9 , which does not exist (perhaps a missing channel);
├─ snippy 4.4.5 would require
│ └─ bcftools >=1.9,<1.10 , which does not exist (perhaps a missing channel);
└─ snippy [4.5.0|4.5.1|4.6.0] would require
└─ bcftools >=1.10 , which does not exist (perhaps a missing channel).

@Jeewan-Thapa Jeewan-Thapa changed the title bcftools error encountered while installing snippy in macOS Sonoma 14.4.1 Request to troubleshoot bcftools error encountered while installing snippy in macOS Sonoma 14.4.1 May 16, 2024
@ammaraziz
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bcftools is not available for arm platforms
https://anaconda.org/bioconda/bcftools

Use Rosetta emulation on macos arm machines
https://support.apple.com/en-us/102527

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