[BUG] Error in Gizmo showcase with Bokeh 3

[swainn]

Describe the bug
I get ValueError when visiting the Bokeh page of the Gizmo showcase app when Bokeh 3.x is installed.

To Reproduce
Steps to reproduce the behavior:

1. Install Gizmo Showcase
2. conda install bokeh=3
3. Start Tethys
4. Navigate to the Bokeh View under Plot Views in the Gizmo Showcase app.

Expected behavior
It should render the page without error showing bokeh plots.

Errors/Traceback

Environment:


Request Method: GET
Request URL: http://127.0.0.1:8000/apps/gizmo-showcase/bokeh/bokeh-view/

Django Version: 3.2.19
Python Version: 3.11.4
Installed Applications:
('channels',
 'django.contrib.admin',
 'django.contrib.auth',
 'django.contrib.contenttypes',
 'django.contrib.sessions',
 'django.contrib.messages',
 'django.contrib.staticfiles',
 'django_bootstrap5',
 'tethys_apps',
 'tethys_compute',
 'tethys_config',
 'tethys_gizmos',
 'tethys_layouts',
 'tethys_sdk',
 'tethys_services',
 'tethys_quotas',
 'guardian',
 'rest_framework',
 'rest_framework.authtoken')
Installed Middleware:
('django.contrib.sessions.middleware.SessionMiddleware',
 'django.middleware.common.CommonMiddleware',
 'django.middleware.csrf.CsrfViewMiddleware',
 'django.contrib.auth.middleware.AuthenticationMiddleware',
 'django.contrib.messages.middleware.MessageMiddleware',
 'tethys_portal.middleware.TethysMfaRequiredMiddleware',
 'django.middleware.clickjacking.XFrameOptionsMiddleware',
 'tethys_portal.middleware.TethysAppAccessMiddleware')



Traceback (most recent call last):
  File "/home/aquadev/miniconda3/envs/microtethys/lib/python3.11/site-packages/django/core/handlers/exception.py", line 38, in inner
    response = await get_response(request)
  File "/home/aquadev/miniconda3/envs/microtethys/lib/python3.11/site-packages/django/core/handlers/base.py", line 233, in _get_response_async
    response = await wrapped_callback(request, *callback_args, **callback_kwargs)
  File "/home/aquadev/tethys/tethys_apps/decorators.py", line 39, in wrapper
    return controller(request, *args, **kwargs)
  File "/home/aquadev/miniconda3/envs/microtethys/lib/python3.11/site-packages/django/contrib/auth/decorators.py", line 21, in _wrapped_view
    return view_func(request, *args, **kwargs)
  File "/home/aquadev/tethysapp-gizmo_showcase/tethysapp/gizmo_showcase/controllers/bokeh.py", line 141, in bokeh_view
    select.toolbar.active_multi = range_tool
  File "/home/aquadev/miniconda3/envs/microtethys/lib/python3.11/site-packages/bokeh/core/has_props.py", line 327, in __setattr__
    return super().__setattr__(name, value)
  File "/home/aquadev/miniconda3/envs/microtethys/lib/python3.11/site-packages/bokeh/core/property/descriptors.py", line 332, in __set__
    value = self.property.prepare_value(obj, self.name, value)
  File "/home/aquadev/miniconda3/envs/microtethys/lib/python3.11/site-packages/bokeh/core/property/bases.py", line 364, in prepare_value
    raise ValueError(f"failed to validate {obj_repr}.{name}: {error}")

Exception Type: ValueError at /apps/gizmo-showcase/bokeh/bokeh-view/
Exception Value: failed to validate Toolbar(id='p1280', ...).active_multi: expected an element of either Null, Auto or Instance(GestureTool), got RangeTool(id='p1300', ...)

Screenshots
N/A

Tethys Environment Information
Include output from these commands:

• tethys version
• conda info
• conda list

tethys version
4.1.1.dev20+ged56463f

conda info

     active environment : microtethys
    active env location : /home/aquadev/miniconda3/envs/microtethys
            shell level : 2
       user config file : /home/aquadev/.condarc
 populated config files : /home/aquadev/.condarc
          conda version : 23.3.1
    conda-build version : not installed
         python version : 3.10.11.final.0
       virtual packages : __archspec=1=x86_64
                          __glibc=2.35=0
                          __linux=5.15.90.1=0
                          __unix=0=0
       base environment : /home/aquadev/miniconda3  (writable)
      conda av data dir : /home/aquadev/miniconda3/etc/conda
  conda av metadata url : None
           channel URLs : https://repo.anaconda.com/pkgs/main/linux-64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/r/linux-64
                          https://repo.anaconda.com/pkgs/r/noarch
          package cache : /home/aquadev/miniconda3/pkgs
                          /home/aquadev/.conda/pkgs
       envs directories : /home/aquadev/miniconda3/envs
                          /home/aquadev/.conda/envs
               platform : linux-64
             user-agent : conda/23.3.1 requests/2.29.0 CPython/3.10.11 Linux/5.15.90.1-microsoft-standard-WSL2 ubuntu/22.04.2 glibc/2.35 solver/libmamba conda-libmamba-solver/23.3.0 libmambapy/1.4.1
                UID:GID : 1000:1000
             netrc file : None
           offline mode : False

conda list
# packages in environment at /home/aquadev/miniconda3/envs/microtethys:
#
# Name                    Version                   Build  Channel
_libgcc_mutex             0.1                 conda_forge    conda-forge
_openmp_mutex             4.5                       2_gnu    conda-forge
appdirs                   1.4.4              pyh9f0ad1d_0    conda-forge
asgiref                   3.7.2              pyhd8ed1ab_0    conda-forge
attrs                     23.1.0             pyh71513ae_1    conda-forge
autobahn                  23.6.2             pyhd8ed1ab_0    conda-forge
automat                   22.10.0            pyhd8ed1ab_0    conda-forge
bcrypt                    3.2.2           py311hd4cff14_1    conda-forge
beautifulsoup4            4.12.2             pyha770c72_0    conda-forge
bokeh                     3.2.1           py311h92b7b1e_0  
boltons                   23.0.0             pyhd8ed1ab_0    conda-forge
brotli-python             1.0.9           py311ha362b79_9    conda-forge
bzip2                     1.0.8                h7f98852_4    conda-forge
c-ares                    1.19.1               hd590300_0    conda-forge
ca-certificates           2023.7.22            hbcca054_0    conda-forge
certifi                   2023.7.22       py311h06a4308_0  
cffi                      1.15.1          py311h409f033_3    conda-forge
channels                  3.0.5              pyhd8ed1ab_0    conda-forge
charset-normalizer        3.2.0              pyhd8ed1ab_0    conda-forge
colorama                  0.4.6              pyhd8ed1ab_0    conda-forge
conda                     23.7.2          py311h38be061_0    conda-forge
conda-libmamba-solver     23.7.0             pyhd8ed1ab_0    conda-forge
conda-package-handling    2.2.0              pyh38be061_0    conda-forge
conda-package-streaming   0.9.0              pyhd8ed1ab_0    conda-forge
constantly                15.1.0                     py_0    conda-forge
contourpy                 1.1.0           py311h9547e67_0    conda-forge
cryptography              41.0.3          py311h63ff55d_0    conda-forge
daphne                    3.0.2              pyhd8ed1ab_0    conda-forge
django                    3.2.19             pyhd8ed1ab_0    conda-forge
django-bootstrap5         23.3               pyhd8ed1ab_0    conda-forge
django-guardian           2.4.0              pyhd8ed1ab_0    conda-forge
django-model-utils        4.3.1              pyhd8ed1ab_0    conda-forge
djangorestframework       3.14.0             pyhd8ed1ab_0    conda-forge
fmt                       9.1.0                h924138e_0    conda-forge
freetype                  2.12.1               hca18f0e_1    conda-forge
geojson                   3.0.1              pyhd8ed1ab_0    conda-forge
hyperlink                 21.0.0             pyhd3deb0d_0    conda-forge
icu                       72.1                 hcb278e6_0    conda-forge
idna                      3.4                pyhd8ed1ab_0    conda-forge
incremental               22.10.0            pyhd8ed1ab_0    conda-forge
jinja2                    3.1.2              pyhd8ed1ab_1    conda-forge
jsonpatch                 1.32               pyhd8ed1ab_0    conda-forge
jsonpointer               2.0                        py_0    conda-forge
keyutils                  1.6.1                h166bdaf_0    conda-forge
krb5                      1.21.2               h659d440_0    conda-forge
lcms2                     2.15                 haa2dc70_1    conda-forge
ld_impl_linux-64          2.40                 h41732ed_0    conda-forge
lerc                      4.0.0                h27087fc_0    conda-forge
libarchive                3.6.2                h039dbb9_1    conda-forge
libblas                   3.9.0           17_linux64_openblas    conda-forge
libcblas                  3.9.0           17_linux64_openblas    conda-forge
libcurl                   8.2.1                hca28451_0    conda-forge
libdeflate                1.18                 h0b41bf4_0    conda-forge
libedit                   3.1.20191231         he28a2e2_2    conda-forge
libev                     4.33                 h516909a_1    conda-forge
libexpat                  2.5.0                hcb278e6_1    conda-forge
libffi                    3.4.2                h7f98852_5    conda-forge
libgcc-ng                 13.1.0               he5830b7_0    conda-forge
libgfortran-ng            13.1.0               h69a702a_0    conda-forge
libgfortran5              13.1.0               h15d22d2_0    conda-forge
libgomp                   13.1.0               he5830b7_0    conda-forge
libiconv                  1.17                 h166bdaf_0    conda-forge
libjpeg-turbo             2.1.5.1              h0b41bf4_0    conda-forge
liblapack                 3.9.0           17_linux64_openblas    conda-forge
libmamba                  1.4.9                h658169a_0    conda-forge
libmambapy                1.4.9           py311h527f279_0    conda-forge
libnghttp2                1.52.0               h61bc06f_0    conda-forge
libnsl                    2.0.0                h7f98852_0    conda-forge
libopenblas               0.3.23          pthreads_h80387f5_0    conda-forge
libpng                    1.6.39               h753d276_0    conda-forge
libsolv                   0.7.24               hfc55251_1    conda-forge
libsqlite                 3.42.0               h2797004_0    conda-forge
libssh2                   1.11.0               h0841786_0    conda-forge
libstdcxx-ng              13.1.0               hfd8a6a1_0    conda-forge
libtiff                   4.5.1                h8b53f26_0    conda-forge
libuuid                   2.38.1               h0b41bf4_0    conda-forge
libwebp-base              1.3.1                hd590300_0    conda-forge
libxcb                    1.15                 h0b41bf4_0    conda-forge
libxml2                   2.11.5               h0d562d8_0    conda-forge
libzlib                   1.2.13               hd590300_5    conda-forge
lz4-c                     1.9.4                hcb278e6_0    conda-forge
lzo                       2.10              h516909a_1000    conda-forge
markupsafe                2.1.3           py311h459d7ec_0    conda-forge
ncurses                   6.4                  hcb278e6_0    conda-forge
numpy                     1.25.2          py311h64a7726_0    conda-forge
openjpeg                  2.5.0                hfec8fc6_2    conda-forge
openssl                   3.1.2                hd590300_0    conda-forge
packaging                 23.1               pyhd8ed1ab_0    conda-forge
pandas                    2.0.3           py311h320fe9a_1    conda-forge
pillow                    10.0.0          py311h0b84326_0    conda-forge
pip                       23.2.1             pyhd8ed1ab_0    conda-forge
plotly                    5.16.1             pyhd8ed1ab_0    conda-forge
pluggy                    1.2.0              pyhd8ed1ab_0    conda-forge
pthread-stubs             0.4               h36c2ea0_1001    conda-forge
pyasn1                    0.4.8                      py_0    conda-forge
pyasn1-modules            0.2.7                      py_0    conda-forge
pybind11-abi              4                    hd8ed1ab_3    conda-forge
pycosat                   0.6.4           py311hd4cff14_1    conda-forge
pycparser                 2.21               pyhd8ed1ab_0    conda-forge
pyopenssl                 23.2.0             pyhd8ed1ab_1    conda-forge
pysocks                   1.7.1              pyha2e5f31_6    conda-forge
python                    3.11.4          hab00c5b_0_cpython    conda-forge
python-dateutil           2.8.2              pyhd8ed1ab_0    conda-forge
python-tzdata             2023.3             pyhd8ed1ab_0    conda-forge
python_abi                3.11                    3_cp311    conda-forge
pytz                      2023.3             pyhd8ed1ab_0    conda-forge
pyyaml                    6.0             py311hd4cff14_5    conda-forge
readline                  8.2                  h8228510_1    conda-forge
reproc                    14.2.4               h0b41bf4_0    conda-forge
reproc-cpp                14.2.4               hcb278e6_0    conda-forge
requests                  2.31.0             pyhd8ed1ab_0    conda-forge
ruamel.yaml               0.17.32         py311h459d7ec_0    conda-forge
ruamel.yaml.clib          0.2.7           py311h2582759_1    conda-forge
service_identity          18.1.0                     py_0    conda-forge
setuptools                68.1.2             pyhd8ed1ab_0    conda-forge
setuptools-scm            7.1.0              pyhd8ed1ab_0    conda-forge
setuptools_scm            7.1.0                hd8ed1ab_0    conda-forge
six                       1.16.0             pyh6c4a22f_0    conda-forge
soupsieve                 2.3.2.post1        pyhd8ed1ab_0    conda-forge
sqlparse                  0.4.4              pyhd8ed1ab_0    conda-forge
tenacity                  8.2.3              pyhd8ed1ab_0    conda-forge
tethys-platform           4.1.1.dev20+ged56463f          pypi_0    pypi
tethysapp-gizmo-showcase  0.0.1                     dev_0    <develop>
tethysapp-layout-showcase 0.0.1                     dev_0    <develop>
tk                        8.6.12               h27826a3_0    conda-forge
tomli                     2.0.1              pyhd8ed1ab_0    conda-forge
toolz                     0.12.0             pyhd8ed1ab_0    conda-forge
tornado                   6.3.3           py311h459d7ec_0    conda-forge
tqdm                      4.66.1             pyhd8ed1ab_0    conda-forge
twisted                   22.10.0         py311hd4cff14_0    conda-forge
txaio                     23.1.1             pyhd8ed1ab_0    conda-forge
typing-extensions         4.7.1                hd8ed1ab_0    conda-forge
typing_extensions         4.7.1              pyha770c72_0    conda-forge
tzdata                    2023c                h71feb2d_0    conda-forge
urllib3                   2.0.4              pyhd8ed1ab_0    conda-forge
wheel                     0.41.1             pyhd8ed1ab_0    conda-forge
xorg-libxau               1.0.11               hd590300_0    conda-forge
xorg-libxdmcp             1.1.3                h7f98852_0    conda-forge
xyzservices               2023.7.0           pyhd8ed1ab_0    conda-forge
xz                        5.2.6                h166bdaf_0    conda-forge
yaml                      0.2.5                h7f98852_2    conda-forge
yaml-cpp                  0.7.0                h27087fc_2    conda-forge
zope.interface            6.0             py311h2582759_0    conda-forge
zstandard                 0.19.0          py311haa97af0_2    conda-forge
zstd                      1.5.2                hfc55251_7    conda-forge

Additional context
I was testing using microtethys.

[sdc50]

It appears this issue is discussed here: bokeh/bokeh#12971

[sdc50]

It appears that this line:

select.toolbar.active_multi = range_tool

Is not needed. I've removed this line and tested with Bokeh=2.4 and Bokeh=3.3. It works with both.

However, in Bokeh 3.3 the BOKEH_RESOURCES="inline" is not working. This was the default setting. I've changed it to "server" which works in both versions of Bokeh. The error when using "inline" is a JavaScript error:

Uncaught ReferenceError: Bokeh is not defined
    at HTMLDocument.fn (bokeh-view/:242:5)
fn @ bokeh-view/:242

and I believe is a bug with Bokeh.

[sdc50]

I created this discourse topic to find out if this change is a bug or an intended change in Bokeh. Until this is fixed in Bokeh I've created some logic to set BOKEH_RESOURCES to server (for the gizmo only) if it is set to inline and Bokeh version is >2.

[sdc50]

It appears, per the response from discourse topic, that Bokeh components was never intended to support the inline resources option.

[sdc50]

closed by #967