Merge pull request #182 from smart-on-fhir/mikix/py3.13 #87

	name: CI
	on:
	pull_request:
	push:
	branches:
	- main

	# The goal here is to cancel older workflows when a PR is updated (because it's pointless work)
	concurrency:
	group: ${{ github.workflow }}-${{ github.head_ref \|\| github.ref_name }}
	cancel-in-progress: true

	jobs:
	unittest:
	name: unit tests
	runs-on: ubuntu-latest
	strategy:
	matrix:
	python-version: ["3.9", "3.10", "3.11", "3.12", "3.13"]

	steps:
	- uses: actions/checkout@v4

	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v5
	with:
	python-version: ${{ matrix.python-version }}
	cache: pip

	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	pip install .[tests]

	- name: Test with pytest
	run: \|
	python -m pytest --cov=fhirclient --cov-report=xml

	- name: Log missing coverage
	run: \|
	coverage report -m --skip-covered

	# Disable coverage checking until there is a secure fix for:
	# https://github.com/orgoro/coverage/issues/259
	# - name: Check coverage report
	# if: github.ref != 'refs/heads/main'
	# uses: orgoro/[email protected]
	# with:
	# coverageFile: coverage.xml
	# token: ${{ secrets.GITHUB_TOKEN }}
	# thresholdAll: .45
	# thresholdNew: 1
	# thresholdModified: .40

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