README.md

BEDOPS v2.4.12: high-performance genomic feature operations

About

BEDOPS v2.4.12 is a suite of tools to address common questions raised in genomic studies — mostly with regard to overlap and proximity relationships between data sets. It aims to be scalable and flexible, facilitating the efficient and accurate analysis and management of large-scale genomic data.

The overview section of the BEDOPS v2.4.12 documentation summarizes the toolkit, functionality and performance enhancements. The reference table offers documentation for all applications and scripts.

Downloads

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x86-64 (64-bit) binaries i386 (32-bit) binaries Installation instructions for Linux hosts	Intel (32-/64-bit, 10.7-10.10) installer package Installation instructions for Mac OS X hosts	Source code (tar.gz) Source code (zip) =======
x86-64 (64-bit) binaries i386 (32-bit) binaries Installation instructions	Intel (32-/64-bit) installer Installation instructions	Source code (tar.gz) Source code (zip) >>>>>>> v2p5p0 Compilation instructions

Documentation

<<<<<<< HEAD Complete documentation for BEDOPS v2.4.12 tools is available at: https://bedops.readthedocs.org/

Citation

If you use BEDOPS v2.4.12 in your research, please cite the following manuscript:

Complete documentation for BEDOPS v2.5.0 tools is available at: https://bedops.readthedocs.org/

Citation

If you use BEDOPS v2.5.0 in your research, please cite the following manuscript:

v2p5p0

Shane Neph, M. Scott Kuehn, Alex P. Reynolds, et al.
[BEDOPS: high-performance genomic feature operations
Bioinformatics (2012) 28 (14): 1919-1920.] (http://bioinformatics.oxfordjournals.org/content/28/14/1919.abstract)

Copyright

Copyright (C) 2011-2015 Shane J. Neph, M. Scott Kuehn and Alex P. Reynolds

Source code, documentation and media assets released under GNU Public License Version 2 (GPL v2).