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Samtools - Developer Information |
The SAMtools source code is hosted on Github. You can check out the latest development source code with:
git clone https://github.com/samtools/samtools.git
git clone https://github.com/samtools/bcftools.git
git clone https://github.com/samtools/htslib.git
Please note the source code in this repository is under development and make contain experimental or untested code. We recommend you do not use it in production pipelines unless specifically advised.