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develop semantic annotation helper functions #313

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laijasmine opened this issue Jul 31, 2020 · 0 comments
Open
2 tasks

develop semantic annotation helper functions #313

laijasmine opened this issue Jul 31, 2020 · 0 comments

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@laijasmine
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To make supporting EML2.2.0 easier we should consider developing some helper functions for ontologies like OBOE through bioportal.

Potentially using BioPortal's Term Search API endpoint (documented at http://data.bioontology.org/documentation#nav_search) which can be used to find the most likely term(s) given a free text input (i.e., an attributeName).

  • a function that gets the propertyURI when given a label?
  • a similar function that gets the valueURI
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