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This repository has been archived by the owner on Dec 3, 2019. It is now read-only.
It appears that attempting to run an MCMCMC with MPI consistently results in a segmentation fault. MCMCMC appears to work without MPI, and I can run a regular MCMC with MPI with no issues.
I'm attaching a simple script that reproduces the error, as well the stdout and stderror when I attempt to run it.
I tested with an older version of revbayes (8c3100a) and could run mcmcmc with mpi with no obvious problems. Using the recent commit 9afdfe3 from Sept 11, 2019 results in a segfault.
I'm attaching a much simpler script (single exponentially distributed variable) that can be used to reproduce the issue.
I believe this commit (938d286) should have fixed the issue (at least the segfault disappears and the simple test case attached above seems to run fine). @hoehna It would be great if you could have a look at it to see if I had fixed it right. Thanks!
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It appears that attempting to run an MCMCMC with MPI consistently results in a segmentation fault. MCMCMC appears to work without MPI, and I can run a regular MCMC with MPI with no issues.
I'm attaching a simple script that reproduces the error, as well the stdout and stderror when I attempt to run it.
Environment:
OS: Ubuntu 18.04
GCC: 8.3.0
OpenMPI: 4.0.1
RevBayes: 8eebff4
(development branch, Aug 23, 2019)
mc_cubed_test.zip
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