You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
{{ message }}
This repository has been archived by the owner on Dec 3, 2019. It is now read-only.
Hi, I'd like to test a substitution matrix on a single branch through the rev language. Has anybody successfully done that before? For a tree with one taxon, I seem to have difficulties to use the dnBDP, or similar distributions for branch-lengh trees, or to read a tree with a single branch into RevBayes.
In that latter case it seems it reads the name incorrectly: after reading a tree file containing:
(t1:1.0);
I get
print(startingTree.names())
,t1
The comma worries me, and when I use dnPhyloCTMC with that tree and a sequence file, I get
Error: Ambiguous taxon name.
Any other idea of what I should use?
Thanks!
The text was updated successfully, but these errors were encountered:
Sign up for freeto subscribe to this conversation on GitHub.
Already have an account?
Sign in.
Hi, I'd like to test a substitution matrix on a single branch through the rev language. Has anybody successfully done that before? For a tree with one taxon, I seem to have difficulties to use the dnBDP, or similar distributions for branch-lengh trees, or to read a tree with a single branch into RevBayes.
In that latter case it seems it reads the name incorrectly: after reading a tree file containing:
(t1:1.0);
I get
print(startingTree.names())
,t1
The comma worries me, and when I use dnPhyloCTMC with that tree and a sequence file, I get
Error: Ambiguous taxon name.
Any other idea of what I should use?
Thanks!
The text was updated successfully, but these errors were encountered: