build(code-cover.yml): Don't need a second environment for this code #83
Workflow file for this run
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| # This workflow is purely to determine code coverage. | ||
| # Since there were issues with the pinned version of older versions of ISIS | ||
| # and we really only need to run coverage once (not N times for every combination | ||
| # in a test matrix), there is some duplication with the primary testing workflow. | ||
| name: Code Coverage | ||
| on: [push] | ||
| env: | ||
| isis-data: /test-resources/ISISDATA/ | ||
| jobs: | ||
| coverage: | ||
| runs-on: ubuntu-latest | ||
| defaults: | ||
| run: | ||
| shell: bash -l {0} | ||
| steps: | ||
| - name: Conda setup | ||
| uses: mamba-org/setup-micromamba@v1 | ||
| with: | ||
| environment-name: isis | ||
| create-args: >- | ||
| isis=8.0.3 | ||
| condarc: | | ||
| channels: | ||
| - usgs-astrogeology | ||
| - conda-forge | ||
| channel-priority: flexible | ||
| - name: Checkout | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| ref: ${{ github.event.pull_request.head.sha }} | ||
| - name: Setup test-resources/ | ||
| run: | | ||
| mkdir $GITHUB_WORKSPACE/test-resources/ | ||
| - name: Download IMG | ||
| run: curl "https://hirise-pds.lpl.arizona.edu/PDS/EDR/PSP/ORB_010500_010599/PSP_010502_2090/PSP_010502_2090_RED5_0.IMG" -o $GITHUB_WORKSPACE/test-resources/PSP_010502_2090_RED5_0.img | ||
| - name: Install kalasiris | ||
| run: pip install -e . | ||
| - name: Test with pytest and generate coverage report | ||
| run: | | ||
| micromamba install -y pytest | ||
| micromamba install -y pytest-cov | ||
| export ISISROOT=$MAMBA_ROOT_PREFIX/envs/isis | ||
| export ISISDATA=$MAMBA_ROOT_PREFIX/envs/isis | ||
| pytest --cov=./kalasiris --cov-report=xml | ||
| - name: Upload coverage to Codecov | ||
| uses: codecov/codecov-action@v4 | ||
| with: | ||
| verbse: true | ||
| env: | ||
| CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} | ||
