test(code-cover.yml): Typo fix. #92
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| # This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: Python Testing | |
| on: [push] | |
| jobs: | |
| resources: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Setup test-resources/ | |
| run: | | |
| mkdir test-resources/ | |
| - name: Download IMG | |
| run: curl "https://hirise-pds.lpl.arizona.edu/PDS/EDR/PSP/ORB_010500_010599/PSP_010502_2090/PSP_010502_2090_RED5_0.IMG" -o test-resources/PSP_010502_2090_RED5_0.img | |
| - name: Tar file | |
| run: tar -cvf img.tar test-resources/ | |
| - name: Upload img artifact | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: img-artifact | |
| path: img.tar | |
| retention-days: 3 | |
| build: | |
| needs: resources | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| strategy: | |
| matrix: | |
| # isis 4.4.0 apparently needs jpeg 9b, which is missing | |
| isis-version: [5.0.2, 6.0.0, 7.2.0] | |
| steps: | |
| - name: Conda setup | |
| uses: mamba-org/provision-with-micromamba@main | |
| with: | |
| environment-file: false | |
| channel-priority: flexible | |
| channels: usgs-astrogeology, conda-forge | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| with: | |
| ref: ${{ github.event.pull_request.head.sha }} | |
| - name: Download IMG artifact | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: img-artifact | |
| - name: Unpack Tar | |
| run: | | |
| tar -xvf img.tar | |
| ls -R | |
| - name: Install ISIS | |
| run: | | |
| micromamba create --name isis | |
| micromamba activate isis | |
| micromamba install -y isis=${{ matrix.isis-version }} | |
| - name: Lint with flake8 | |
| run: | | |
| micromamba activate isis | |
| micromamba install -y flake8 | |
| # stop the build if there are Python syntax errors or undefined names | |
| flake8 kalasiris tests --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| flake8 kalasiris tests --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
| - name: Test Install | |
| run: python -m pip install -e . | |
| - name: Test with pytest | |
| run: | | |
| micromamba activate isis | |
| export ISISROOT=$MAMBA_ROOT_PREFIX/envs/isis | |
| export ISISDATA=$MAMBA_ROOT_PREFIX/envs/isis | |
| micromamba install -y pytest | |
| python --version | |
| pytest |