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Add experimental code for data fragments. (#282) #1050

Add experimental code for data fragments. (#282)

Add experimental code for data fragments. (#282) #1050

Workflow file for this run

name: Ubuntu CI
on:
push:
pull_request:
schedule:
- cron: '30 2 * * 1' # Every Monday @ 2h30am UTC
env:
POETRY_VERSION: 1.2.1
MINIO_SERVER_DOWNLOAD_URL: https://dl.min.io/server/minio/release/linux-amd64/archive/minio_20230907020502.0.0_amd64.deb
MINIO_CLIENT_DOWNLOAD_URL: https://dl.min.io/client/mc/release/linux-amd64/archive/mcli_20230907224855.0.0_amd64.deb
jobs:
check_skip:
runs-on: ubuntu-latest
if: |
!contains(format('{0} {1} {2}', github.event.head_commit.message, github.event.pull_request.title, github.event.pull_request.body), '[skip ci]')
steps:
- run: |
cat <<'MESSAGE'
github.event_name: ${{ toJson(github.event_name) }}
github.event:
${{ toJson(github.event) }}
MESSAGE
test:
needs: check_skip
runs-on: ubuntu-latest
if: "!contains(github.event.head_commit.message, '[skip ci]')"
strategy:
fail-fast: false
matrix:
python-version: ["3.8", "3.9", "3.10"]
steps:
- name: Create Cache Hash
run: |
export HASH=$(sha256sum <<EOT | cut -c -16
${{ env.POETRY_VERSION }}
${{ env.MINIO_SERVER_DOWNLOAD_URL }}
${{ env.MINIO_CLIENT_DOWNLOAD_URL }}
EOT
)
echo "INSTALL_CACHE_HASH=$HASH" >> $GITHUB_ENV
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Cache Installations
id: cache-installs
uses: actions/cache@v3
with:
path: ~/.local
key: install-${{ env.INSTALL_CACHE_HASH }}-2
- name: Install Poetry
if: steps.cache-installs.outputs.cache-hit != 'true'
run: |
curl -sSL https://install.python-poetry.org | python3 - --version ${{ env.POETRY_VERSION }}
- name: Test poetry run
run: poetry --version
- name: Install Minio Server and Client
if: steps.cache-installs.outputs.cache-hit != 'true'
run: |
cd /tmp
wget -q -c ${{ env.MINIO_SERVER_DOWNLOAD_URL }} -O minio.deb
wget -q -c ${{ env.MINIO_CLIENT_DOWNLOAD_URL }} -O mcli.deb
dpkg-deb --extract minio.deb /tmp/minio
dpkg-deb --extract mcli.deb /tmp/mcli
mkdir -p "${HOME}/.local/bin"
echo "${HOME}/.local/bin" >> $GITHUB_PATH
install /tmp/minio/usr/local/bin/minio "${HOME}/.local/bin/minio"
install /tmp/mcli/usr/local/bin/mcli "${HOME}/.local/bin/mc"
- name: Test minio run
run: |
minio --help
mc --help
- name: Checkout source
uses: actions/checkout@v2
with:
fetch-depth: 1
- name: Install dask-ms base
run: poetry install --extras "testing arrow zarr"
- name: Test dask-ms base
run: poetry run py.test -s -vvv daskms/
- name: Install dask-ms complete
run: poetry install --extras "testing complete"
- name: Test dask-ms complete
run: poetry run py.test -s -vvv daskms/
# - name: Debug with tmate on failure
# if: ${{ failure() }}
# uses: mxschmitt/action-tmate@v3
test_apps:
needs: check_skip
runs-on: ubuntu-latest
if: "!contains(github.event.head_commit.message, '[skip ci]')"
strategy:
fail-fast: false
matrix:
python-version: ["3.10"]
steps:
- name: Create Cache Hash
run: |
export HASH=$(sha256sum <<EOT | cut -c -16
${{ env.POETRY_VERSION }}
EOT
)
echo "INSTALL_CACHE_HASH=$HASH" >> $GITHUB_ENV
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Cache Installations
id: cache-installs
uses: actions/cache@v3
with:
path: ~/.local
key: install-${{ env.INSTALL_CACHE_HASH }}-0
- name: Install Poetry
if: steps.cache-installs.outputs.cache-hit != 'true'
run: |
curl -sSL https://install.python-poetry.org | python3 - --version ${{ env.POETRY_VERSION }}
- name: Test poetry run
run: poetry --version
- name: Checkout source
uses: actions/checkout@v2
with:
fetch-depth: 1
- name: Install dask-ms complete
run: poetry install --extras "testing complete"
- name: Test dask-ms applications
run: poetry run py.test -s -vvv --applications daskms/
# - name: Debug with tmate on failure
# if: ${{ failure() }}
# uses: mxschmitt/action-tmate@v3
deploy:
needs: [test, test_apps]
runs-on: ubuntu-latest
# Run on a push to a tag or master
if: >
github.event_name == 'push' &&
(startsWith(github.event.ref, 'refs/tags') ||
github.event.ref == 'refs/heads/master')
steps:
- name: Set up Python 3.8
uses: actions/setup-python@v4
with:
python-version: 3.8
- name: Install Poetry
uses: abatilo/actions-poetry@v2
with:
poetry-version: ${{ env.POETRY_VERSION }}
- name: Checkout source
uses: actions/checkout@v2
with:
fetch-depth: 1
- name: Build distributions
run: poetry build
- name: Publish distribution 📦 to Test PyPI
uses: pypa/gh-action-pypi-publish@master
with:
user: __token__
password: ${{ secrets.test_pypi_token }}
repository_url: https://test.pypi.org/legacy/
continue-on-error: true
- name: Publish distribution 📦 to PyPI
uses: pypa/gh-action-pypi-publish@master
if: github.event_name == 'push' && startsWith(github.event.ref, 'refs/tags')
with:
user: __token__
password: ${{ secrets.pypi_token }}