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db.yaml
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on:
push:
branches:
- master
- main
pull_request:
branches:
- master
- main
name: DBs (Linux)
jobs:
database:
runs-on: ubuntu-latest
services:
oracle:
image: gvenzl/oracle-xe:21.3.0
ports:
- 1521:1521
env:
ORACLE_RANDOM_PASSWORD: true
ORACLE_DATABASE: test
APP_USER: RodbcR
APP_USER_PASSWORD: Password12
options: >-
--health-cmd healthcheck.sh
--health-interval 10s
--health-timeout 5s
--health-retries 10
postgres:
image: postgres
ports:
- 5432:5432
env:
POSTGRES_USER: postgres
POSTGRES_PASSWORD: password
POSTGRES_DB: test
options: --health-cmd pg_isready --health-interval 10s --health-timeout 5s --health-retries 5
sqlserver:
image: mcr.microsoft.com/mssql/server:2017-latest-ubuntu
ports:
- 1433:1433
env:
ACCEPT_EULA: Y
SA_PASSWORD: Password12
env:
CRAN: "https://packagemanager.rstudio.com/cran/__linux__/jammy/latest"
ODBCSYSINI: ${{ github.workspace }}/.github/odbc
TNS_ADMIN: ${{ github.workspace }}/.github/odbc
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v3
- uses: r-lib/actions/setup-r@v2
- name: Install MySQL Driver
run: |
sudo systemctl start mysql.service
mysql -uroot -h127.0.0.1 -proot -e 'CREATE DATABASE `test`;'
.github/odbc/install-mariadb-driver.sh
echo "ODBC_CS_MYSQL=dsn=MySQL" >> $GITHUB_ENV
- name: Install SQLite Driver
run: |
sudo apt-get install -y libsqliteodbc
echo "ODBC_CS_SQLITE=dsn=SQLite" >> $GITHUB_ENV
- name: Install PostgreSQL Driver
run: |
sudo apt-get install -y unixodbc-dev odbc-postgresql devscripts
echo "ODBC_CS_POSTGRES=dsn=PostgreSQL" >> $GITHUB_ENV
- name: Install SQL Server Driver
run: |
echo "ODBC_CS_SQLSERVER=dsn=MicrosoftSQLServer;UID=SA;PWD=Password12" >> $GITHUB_ENV
sudo bash -c "
curl https://packages.microsoft.com/keys/microsoft.asc | apt-key add - \
&& curl https://packages.microsoft.com/config/ubuntu/16.04/prod.list > /etc/apt/sources.list.d/mssql-release.list \
&& apt-get update \
&& ACCEPT_EULA=Y apt-get install -y msodbcsql17 \
&& ln -s /opt/microsoft/msodbcsql17/lib64/libmsodbcsql-17.*.so.* /opt/microsoft/msodbcsql17/lib64/libmsodbcsql-17.so"
- name: Install Oracle Driver
run: |
.github/odbc/install-oracle-driver.sh
echo "LD_LIBRARY_PATH=/opt/oracle/instantclient_21_12:$LD_LIBRARY_PATH" >> $GITHUB_ENV
echo "ODBC_CS_ORACLE=dsn=Oracle;UID=RodbcR;PWD=Password12;DBQ=test" >> $GITHUB_ENV
- name: Install Snowflake Driver
run: |
echo "ODBC_CS_SNOWFLAKE=dsn=Snowflake" >> $GITHUB_ENV
curl https://sfc-repo.snowflakecomputing.com/odbc/linux/3.2.0/snowflake_linux_x8664_odbc-3.2.0.tgz --output snowflake_linux_x8664_odbc-3.2.0.tgz
gunzip snowflake_linux_x8664_odbc-3.2.0.tgz
tar -xvf snowflake_linux_x8664_odbc-3.2.0.tar
mv snowflake_odbc $ODBCSYSINI
rm snowflake_linux_x8664_odbc-3.2.0.tar
cp .github/odbc/simba.snowflake.ini .github/odbc/snowflake_odbc/lib/simba.snowflake.ini
echo "CABundleFile=$ODBCSYSINI/snowflake_odbc/lib/cacert.pem" >> .github/odbc/snowflake_odbc/lib/simba.snowflake.ini
echo "ErrorMessagesPath=$ODBCSYSINI/snowflake_odbc/ErrorMessages/" >> .github/odbc/snowflake_odbc/lib/simba.snowflake.ini
echo "Driver=SnowflakeDSIIDriver" | tee -a $ODBCSYSINI/odbc.ini
# note that this assumes Snowflake is the last odbc.ini entry
- name: Prepare Snowflake private key
run: |
echo "${{ secrets.SNOWFLAKE_PRIVATE_KEY }}" > $ODBCSYSINI/private_key.pem
echo "PRIV_KEY_FILE=$ODBCSYSINI/private_key.pem" | tee -a $ODBCSYSINI/odbc.ini
export SNOWFLAKE_PRIVATE_KEY_EXISTS=TRUE
- name: Install dependencies
uses: r-lib/actions/setup-r-dependencies@v2
with:
needs: check
- name: Install locally to avoid error with test_local()
run: |
R CMD INSTALL .
env:
LIB_DIR: /usr/lib/x86_64-linux-gnu/
INCLUDE_DIR: /usr/include
- name: Test
run: |
options("odbc.interruptible"=TRUE);testthat::test_local(reporter = testthat::ProgressReporter$new(max_failures = Inf, update_interval = Inf))
shell: Rscript {0}