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integration-test.yaml
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name: Perform test database build and verification
on:
pull_request:
workflow_dispatch:
defaults:
run:
shell: bash
jobs:
build:
strategy:
fail-fast: true
matrix:
os: [ubuntu-latest]
python-version: ["3.10"]
TANGOS_TESTING_DB_BACKEND: [sqlite]
runs-on: ${{ matrix.os }}
env:
C: gcc-10
CXX: g++-10
steps:
- name: Install Python
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install GCC
shell: bash
run: |
sudo apt-get update -qq
sudo apt install gcc-10 g++-10
- uses: actions/checkout@v4
- name: Update python pip/setuptools/wheel
run: |
python -m pip install --upgrade pip setuptools wheel
- name: Build and install tangos
run: |
pip install -e .
- name: Install latest pynbody
run: python -m pip install --pre pynbody
# Or: python -m pip install git+https://github.com/pynbody/pynbody.git
- name: Install yt
run: python -m pip install 'yt<4.4.0'
- name: Build test database
working-directory: test_tutorial_build
run: export INTEGRATION_TESTING=1; bash build.sh
- uses: actions/upload-artifact@v4
with:
name: Tangos database
path: test_tutorial_build/data.db
- name: Verify database
working-directory: test_tutorial_build
run: |
wget https://zenodo.org/record/11122073/files/reference_database.db?download=1 -O reference_database.db -nv
tangos diff data.db reference_database.db --property-tolerance dm_density_profile 1e-2 0 --property-tolerance gas_map 1e-2 0 --property-tolerance gas_map_sideon 1e-2 0 --property-tolerance gas_map_faceon 1e-2 0
# --property-tolerance dm_density_profile here is because if a single particle crosses between bins
# (which seems to happen due to differing library versions), the profile can change by this much
#
# Images also occasionally differ by one or two particles. To deal with this previously had:
# --ignore-value-of gas_map gas_map_faceon gas_map_sideon uvi_image uvi_image_sideon uvi_image_faceon