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tree input fails #3

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bomeara opened this issue Aug 14, 2017 · 0 comments
Open

tree input fails #3

bomeara opened this issue Aug 14, 2017 · 0 comments

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@bomeara
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bomeara commented Aug 14, 2017

((((Homo_sapiens,Macaca_mulatta)Catarrhini,((Melursus_ursinus,Canis_lupus_pallipes)Caniformia,((Panthera_pardus,Panthera_tigris)Panthera,Herpestes_fuscus))Carnivora)Boreoeutheria,Elephas_maximus)Eutheria,Haliastur_indus)Amniota;

Fails on the website, giving an error of The patristic matrices you are trying to bind are too few; input was 0 and current length is 0. However, this works fine in the R package:

library(datelife)
library(ape)
phy <- read.tree(text="((((Homo_sapiens,Macaca_mulatta)Catarrhini,((Melursus_ursinus,Canis_lupus_pallipes)Caniformia,((Panthera_pardus,Panthera_tigris)Panthera,Herpestes_fuscus))Carnivora)Boreoeutheria,Elephas_maximus)Eutheria,Haliastur_indus)Amniota;")
result <- EstimateDates(input=phy, output.format="phylo.median")
plot(result)
axisPhylo()
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