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fix typo
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oschwengers committed Jan 12, 2024
1 parent 8e30f56 commit 6bdae9c
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion bakta/features/crispr.py
Original file line number Diff line number Diff line change
Expand Up @@ -102,7 +102,7 @@ def predict_crispr(genome: dict, contigs_path: Path):
crispr_spacer['sequence'] = spacer_seq
crispr_array['spacers'].append(crispr_spacer)
spacer_genome_seq = bu.extract_feature_sequence(crispr_spacer, contigs[contig_id])
assert spacer_seq == spacer_genome_seq # assure PILER-CR spacer sequence equal extraction from genome
assert spacer_seq == spacer_genome_seq # assure PILER-CR provided sequence equals sequence extracted from genome
elif(output_section == 'POSITION'):
if(line[0] == '>'):
contig_id = line[1:]
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