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Mongodb error after running booktests #3961

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lgoettgens opened this issue Jul 23, 2024 · 2 comments · Fixed by #3939
Closed

Mongodb error after running booktests #3961

lgoettgens opened this issue Jul 23, 2024 · 2 comments · Fixed by #3939
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@lgoettgens
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Observed in https://github.com/oscar-system/Oscar.jl/actions/runs/10054527830/job/27801036805?pr=3939#step:9:6739

/workspace/srcdir/mongo-c-driver/src/libmongoc/src/mongoc/mongoc-ocsp-cache.c:158 _mongoc_ocsp_cache_get_status(): precondition failed: pthread_mutex_lock ((&ocsp_cache_mutex)) == 0

[1965] signal (6.-6): Aborted
in expression starting at none:0
pthread_kill at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
raise at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
_mongoc_ocsp_cache_get_status at /home/runner/.julia/artifacts/b4eaa7bb890b09ed9a8a26c2b79b8603c581c504/lib/libmongoc-1.0.so (unknown line)
_mongoc_ocsp_tlsext_status at /home/runner/.julia/artifacts/b4eaa7bb890b09ed9a8a26c2b79b8603c581c504/lib/libmongoc-1.0.so (unknown line)
_mongoc_stream_tls_openssl_handshake at /home/runner/.julia/artifacts/b4eaa7bb890b09ed9a8a26c2b79b8603c581c504/lib/libmongoc-1.0.so (unknown line)
mongoc_async_cmd_tls_setup at /home/runner/.julia/artifacts/b4eaa7bb890b09ed9a8a26c2b79b8603c581c504/lib/libmongoc-1.0.so (unknown line)
_mongoc_async_cmd_phase_setup at /home/runner/.julia/artifacts/b4eaa7bb890b09ed9a8a26c2b79b8603c581c504/lib/libmongoc-1.0.so (unknown line)
mongoc_async_cmd_run at /home/runner/.julia/artifacts/b4eaa7bb890b09ed9a8a26c2b79b8603c581c504/lib/libmongoc-1.0.so (unknown line)
mongoc_async_run at /home/runner/.julia/artifacts/b4eaa7bb890b09ed9a8a26c2b79b8603c581c504/lib/libmongoc-1.0.so (unknown line)
mongoc_topology_scanner_work at /home/runner/.julia/artifacts/b4eaa7bb890b09ed9a8a26c2b79b8603c581c504/lib/libmongoc-1.0.so (unknown line)
_mongoc_topology_do_blocking_scan at /home/runner/.julia/artifacts/b4eaa7bb890b09ed9a8a26c2b79b8603c581c504/lib/libmongoc-1.0.so (unknown line)
mongoc_topology_select_server_id at /home/runner/.julia/artifacts/b4eaa7bb890b09ed9a8a26c2b79b8603c581c504/lib/libmongoc-1.0.so (unknown line)
_mongoc_client_end_sessions at /home/runner/.julia/artifacts/b4eaa7bb890b09ed9a8a26c2b79b8603c581c504/lib/libmongoc-1.0.so (unknown line)
mongoc_client_destroy at /home/runner/.julia/artifacts/b4eaa7bb890b09ed9a8a26c2b79b8603c581c504/lib/libmongoc-1.0.so (unknown line)
mongoc_client_destroy at /home/runner/.julia/packages/Mongoc/tJNDW/src/c_api.jl:391 [inlined]
destroy! at /home/runner/.julia/packages/Mongoc/tJNDW/src/types.jl:290
unknown function (ip: 0x7f4937165375)
_jl_invoke at /cache/build/builder-amdci4-0/julialang/julia-release-1-dot-10/src/gf.c:2895 [inlined]
ijl_apply_generic at /cache/build/builder-amdci4-0/julialang/julia-release-1-dot-10/src/gf.c:3077
run_finalizer at /cache/build/builder-amdci4-0/julialang/julia-release-1-dot-10/src/gc.c:318
jl_gc_run_finalizers_in_list at /cache/build/builder-amdci4-0/julialang/julia-release-1-dot-10/src/gc.c:408
run_finalizers at /cache/build/builder-amdci4-0/julialang/julia-release-1-dot-10/src/gc.c:454
ijl_atexit_hook at /cache/build/builder-amdci4-0/julialang/julia-release-1-dot-10/src/init.c:299
jl_repl_entrypoint at /cache/build/builder-amdci4-0/julialang/julia-release-1-dot-10/src/jlapi.c:732
main at /cache/build/builder-amdci4-0/julialang/julia-release-1-dot-10/cli/loader_exe.c:58
unknown function (ip: 0x7f4986629d8f)
__libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
unknown function (ip: 0x4010b8)
Allocations: 36350[6764](https://github.com/oscar-system/Oscar.jl/actions/runs/10054527830/job/27801036805?pr=3939#step:9:6768)4 (Pool: 3634013346; Big: 1054298); GC: 3115

Originally posted by @joschmitt in #3939 (comment)

@lgoettgens
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@benlorenz volunteered to look into this in #3939.

@lgoettgens lgoettgens changed the title Mongodb error when running booktests Mongodb error after running booktests Jul 23, 2024
@lgoettgens
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Fixed in #3963 but waiting for a merge into master as part of #3939

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