Open Problems in Single-Cell Analysis

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30 packages

metrics/trustworthiness
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_dimensionality_reduction

360
metrics/hvg_overlap
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

319
metrics/accuracy
Published Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection

318
metrics/f1
Published Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection

310
data_processors/process_dataset
Published Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection

229
methods/alra
Published Jul 3, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_denoising

176
methods/dca
Published Jul 3, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_denoising

175
methods/knn_smoothing
Published Jul 3, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_denoising

171
methods/scdesign3
Published Jul 9, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

165
methods/magic
Published Jul 3, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_denoising

164
methods/symsim
Published Jul 11, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

157
metrics/downstream
Published Aug 16, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

157
methods/srtsim
Published Jul 10, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

152
methods/zinbwave
Published Jul 11, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

151
methods/splatter
Published Jul 10, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

150
methods/scdesign2
Published Jul 10, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

150
methods/sparsim
Published Jul 11, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

149
control_methods/positive
Published Aug 30, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

148
control_methods/negative
Published Aug 30, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

140
control_methods/perfect_denoising
Published Jul 3, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_denoising

132
control_methods/no_denoising
Published Jul 3, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_denoising

125
methods/simlr
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_dimensionality_reduction

123
metrics/mse
Published Aug 14, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_predict_modality

114
metrics/correlation
Published Aug 14, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_predict_modality

111
datasets/normalization/log_cp
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/openproblems

104
control_methods/positive_control
Published Jul 19, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference

102
project/sync_resources
Published Aug 27, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/core

92
methods/diffusion_map
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_dimensionality_reduction

89
data_processors/process_dataset
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

85
methods/mnnpy
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

82