Fixes #2780 - NTR- subpleural fibroblast

[Caroline-99]

Fixes #2780 Added a new term from Lung Atlas Jamboree

[Caroline-99]

#gogoeditdiff

[github-actions]

Here's a diff of how these changes impact the classified ontology (on -base file):

Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/cl/cl-base.owl
• Version IRI: http://purl.obolibrary.org/obo/cl/releases/2024-11-29/cl-base.owl
• Loaded from: file:/__w/cell-ontology/cell-ontology/src/ontology/cl-base-master.owl/cl-base.owl

Right

• Ontology IRI: http://purl.obolibrary.org/obo/cl/cl-base.owl
• Version IRI: http://purl.obolibrary.org/obo/cl/releases/2024-11-29/cl-base.owl
• Loaded from: file:/__w/cell-ontology/cell-ontology/src/ontology/cl-base-pr.owl/cl-base.owl

Ontology imports

Ontology annotations

subpleural fibroblast http://purl.obolibrary.org/obo/CL_4052029

Added

• subpleural fibroblast IAO_0000115 "A fibroblast that is located beneath the visceral pleura of the lung. This cell contributes to the development of idiopathic pulmonary fibrosis (IPF) by forming fibrotic lesions that originate subpleurally and extend into lung tissue through activation, proliferation, migration, and differentiation into a myofibroblast."

  • hasDbXref "PMID:36543915"

  • hasDbXref "PMID:36769178"

  • hasDbXref "PMID:37291214"

• subpleural fibroblast contributor 0009-0000-8480-9277

• subpleural fibroblast label "subpleural fibroblast"

• subpleural fibroblast date "2024-11-29T13:54:15Z"^^dateTime

• Class: subpleural fibroblast

• subpleural fibroblast EquivalentTo fibroblast and (RO_0002220 some UBERON_0002401)

• subpleural fibroblast SubClassOf fibroblast of lung

• subpleural fibroblast SubClassOf RO_0002220 some UBERON_0002401

[github-actions]

Here's a diff of your edit file (unreasoned)

Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/cl.owl
• Version IRI: None
• Loaded from: file:/__w/cell-ontology/cell-ontology/master/src/ontology/cl-edit.owl

Right

• Ontology IRI: http://purl.obolibrary.org/obo/cl.owl
• Version IRI: None
• Loaded from: file:/__w/cell-ontology/cell-ontology/branch/src/ontology/cl-edit.owl

Ontology imports

Ontology annotations

subpleural fibroblast http://purl.obolibrary.org/obo/CL_4052029

Added

• subpleural fibroblast definition "A fibroblast that is located beneath the visceral pleura of the lung. This cell contributes to the development of idiopathic pulmonary fibrosis (IPF) by forming fibrotic lesions that originate subpleurally and extend into lung tissue through activation, proliferation, migration, and differentiation into a myofibroblast."

  • database_cross_reference "PMID:36543915"

  • database_cross_reference "PMID:37291214"

  • database_cross_reference "PMID:36769178"

• subpleural fibroblast contributor 0009-0000-8480-9277

• subpleural fibroblast label "subpleural fibroblast"

• subpleural fibroblast date "2024-11-29T13:54:15Z"^^dateTime

• Class: subpleural fibroblast

• subpleural fibroblast EquivalentTo fibroblast and (adjacent to some visceral pleura)

• subpleural fibroblast SubClassOf part of some lung