Fixes #2793 - respiratory tract multiciliated cell

[Caroline-99]

• Updated the textual definition and references
• Added developmental linkage

[Caroline-99]

#gogoeditdiff

[github-actions]

Here's a diff of how these changes impact the classified ontology (on -base file):

Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/cl/cl-base.owl
• Version IRI: http://purl.obolibrary.org/obo/cl/releases/2024-11-29/cl-base.owl
• Loaded from: file:/__w/cell-ontology/cell-ontology/src/ontology/cl-base-master.owl/cl-base.owl

Right

• Ontology IRI: http://purl.obolibrary.org/obo/cl/cl-base.owl
• Version IRI: http://purl.obolibrary.org/obo/cl/releases/2024-11-29/cl-base.owl
• Loaded from: file:/__w/cell-ontology/cell-ontology/src/ontology/cl-base-pr.owl/cl-base.owl

Ontology imports

Ontology annotations

UBERON_0004119 http://purl.obolibrary.org/obo/UBERON_0004119

Added

• Class: UBERON_0004119

respiratory ciliated cell http://purl.obolibrary.org/obo/CL_4030034

Removed

• respiratory ciliated cell IAO_0000115 "A multi-ciliated epithelial cell located in the respiratory tract epithelium, characterized by a columnar shape and motile cilia on its apical surface."

  • hasDbXref "PMID:18757316"

  • hasDbXref "PMID:21364219"

Added

• respiratory ciliated cell IAO_0000115 "A multiciliated epithelial cell located in the respiratory tract epithelium, characterized by a columnar shape and motile cilia on its apical surface. This cell develops through a highly orchestrated process, transitioning from basal progenitors via an intermediate stage of deuterosomal cells, which generate the centrioles essential for ciliogenesis."

  • hasDbXref "PMID:37834236"

  • hasDbXref "PMID:18757316"

  • hasDbXref "PMID:34044844"

  • hasDbXref "PMID:21364219"

• respiratory ciliated cell SubClassOf UBERON_0004119

• respiratory ciliated cell SubClassOf RO_0002207 some deuterosomal cell

[github-actions]

Here's a diff of your edit file (unreasoned)

Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/cl.owl
• Version IRI: None
• Loaded from: file:/__w/cell-ontology/cell-ontology/master/src/ontology/cl-edit.owl

Right

• Ontology IRI: http://purl.obolibrary.org/obo/cl.owl
• Version IRI: None
• Loaded from: file:/__w/cell-ontology/cell-ontology/branch/src/ontology/cl-edit.owl

Ontology imports

Ontology annotations

respiratory ciliated cell http://purl.obolibrary.org/obo/CL_4030034

Removed

• respiratory ciliated cell definition "A multi-ciliated epithelial cell located in the respiratory tract epithelium, characterized by a columnar shape and motile cilia on its apical surface."

  • database_cross_reference "PMID:21364219"

  • database_cross_reference "PMID:18757316"

Added

• respiratory ciliated cell definition "A multiciliated epithelial cell located in the respiratory tract epithelium, characterized by a columnar shape and motile cilia on its apical surface. This cell develops through a highly orchestrated process, transitioning from basal progenitors via an intermediate stage of deuterosomal cells, which generate the centrioles essential for ciliogenesis."

  • database_cross_reference "PMID:34044844"

  • database_cross_reference "PMID:21364219"

  • database_cross_reference "PMID:18757316"

  • database_cross_reference "PMID:37834236"

• respiratory ciliated cell SubClassOf directly develops from some deuterosomal cell