NTR-SST-GABAergic-neuron-of-the-striatum

[AvolaAmg]

Fixes #2797

[AvolaAmg]

#gogoeditdiff

[github-actions]

Here's a diff of how these changes impact the classified ontology (on -base file):

Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/cl/cl-base.owl
• Version IRI: http://purl.obolibrary.org/obo/cl/releases/2024-11-28/cl-base.owl
• Loaded from: file:/__w/cell-ontology/cell-ontology/src/ontology/cl-base-master.owl/cl-base.owl

Right

• Ontology IRI: http://purl.obolibrary.org/obo/cl/cl-base.owl
• Version IRI: http://purl.obolibrary.org/obo/cl/releases/2024-11-28/cl-base.owl
• Loaded from: file:/__w/cell-ontology/cell-ontology/src/ontology/cl-base-pr.owl/cl-base.owl

Ontology imports

Ontology annotations

sst GABAergic neuron of the striatum http://purl.obolibrary.org/obo/CL_4042037

Added

• sst GABAergic neuron of the striatum comment "Some striatal SST GABAergic neurons can co-release glutamate and generate excitation-inhibition responses in postsynaptic neurons. This interneuron type has the least dense dendritic branches in the striatum. In the dorsomedial striatum these neurons regulate the activity of striatal projection neurons."

  • hasDbXref "PMID:33742131"

  • hasDbXref "PMID:30467465"

• sst GABAergic neuron of the striatum date "2024-11-27T18:33:46Z"^^dateTime

• sst GABAergic neuron of the striatum label "sst GABAergic neuron of the striatum"@en

• sst GABAergic neuron of the striatum contributor 0000-0002-0098-8958

• sst GABAergic neuron of the striatum hasBroadSynonym "SOM cell"

  • hasDbXref "PMID:30131490"

• sst GABAergic neuron of the striatum IAO_0000115 "A interneuron of the striatum expressing gamma-aminobutyric acid and somatostatin. This interneuron has a fusiform soma with a diameter between 9 - 25 µm, it has a long axon up to the length of 1mm. This neuron type displays a low threshold Ca2+ spike (LTS), a high input resistance, and the expression of long-lasting plateau potentials following depolarization from rest."

  • hasDbXref "PMID:33742131"

  • hasDbXref "PMID:30131490"

  • hasDbXref "PMID:30467465"

• sst GABAergic neuron of the striatum hasRelatedSynonym "striatal SST+ IN"

  • hasDbXref "PMID:33742131"

• Class: sst GABAergic neuron of the striatum

• sst GABAergic neuron of the striatum SubClassOf striatum neuron

• sst GABAergic neuron of the striatum SubClassOf RO_0002292 some PR_000015665

• sst GABAergic neuron of the striatum SubClassOf GABAergic neuron

• sst GABAergic neuron of the striatum SubClassOf BFO_0000002

[github-actions]

Here's a diff of your edit file (unreasoned)

Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/cl.owl
• Version IRI: None
• Loaded from: file:/__w/cell-ontology/cell-ontology/master/src/ontology/cl-edit.owl

Right

• Ontology IRI: http://purl.obolibrary.org/obo/cl.owl
• Version IRI: None
• Loaded from: file:/__w/cell-ontology/cell-ontology/branch/src/ontology/cl-edit.owl

Ontology imports

Ontology annotations

sst GABAergic neuron of the striatum http://purl.obolibrary.org/obo/CL_4042037

Added

• sst GABAergic neuron of the striatum comment "Some striatal SST GABAergic neurons can co-release glutamate and generate excitation-inhibition responses in postsynaptic neurons. This interneuron type has the least dense dendritic branches in the striatum. In the dorsomedial striatum these neurons regulate the activity of striatal projection neurons."

  • database_cross_reference "PMID:33742131"

  • database_cross_reference "PMID:30467465"

• sst GABAergic neuron of the striatum label "sst GABAergic neuron of the striatum"@en

• sst GABAergic neuron of the striatum contributor 0000-0002-0098-8958

• sst GABAergic neuron of the striatum has_broad_synonym "SOM cell"

  • database_cross_reference "PMID:30131490"

• sst GABAergic neuron of the striatum date "2024-11-27T18:33:46Z"^^dateTime

• sst GABAergic neuron of the striatum definition "A interneuron of the striatum expressing gamma-aminobutyric acid and somatostatin. This interneuron has a fusiform soma with a diameter between 9 - 25 µm, it has a long axon up to the length of 1mm. This neuron type displays a low threshold Ca2+ spike (LTS), a high input resistance, and the expression of long-lasting plateau potentials following depolarization from rest."

  • database_cross_reference "PMID:30131490"

  • database_cross_reference "PMID:33742131"

  • database_cross_reference "PMID:30467465"

• sst GABAergic neuron of the striatum has_related_synonym "striatal SST+ IN"

  • database_cross_reference "PMID:33742131"

• Class: sst GABAergic neuron of the striatum

• sst GABAergic neuron of the striatum SubClassOf expresses some somatostatin

• sst GABAergic neuron of the striatum SubClassOf neuron

• sst GABAergic neuron of the striatum SubClassOf capable of some gamma-aminobutyric acid secretion, neurotransmission

• sst GABAergic neuron of the striatum SubClassOf has soma location some striatum

synaptic transmission, GABAergic http://purl.obolibrary.org/obo/GO_0051932

Added

• synaptic transmission, GABAergic EquivalentTo chemical synaptic transmission and (has participant some CHEBI_59888) and (has participant some GABAergic neuron)