diff --git a/.github/workflows/ontobot.yml b/.github/workflows/ontobot.yml index 8117ed8e1..fff79d86f 100644 --- a/.github/workflows/ontobot.yml +++ b/.github/workflows/ontobot.yml @@ -50,7 +50,7 @@ jobs: id: gh-script-issue uses: actions/github-script@v6 with: - # github-token: ${{ secrets.GH_TOKEN }} + github-token: ${{ secrets.ONTOBOT_TOKEN }} script: | const issue_number = context.issue.number const repo = context.repo.owner+"/"+context.repo.repo @@ -60,7 +60,7 @@ jobs: id: gh-script-repo uses: actions/github-script@v6 with: - # github-token: ${{ secrets.GH_TOKEN }} + github-token: ${{ secrets.ONTOBOT_TOKEN }} script: | const repo = context.repo.owner+"/"+context.repo.repo return repo @@ -87,7 +87,7 @@ jobs: ochange process-issue ${{ env.resource }} \ -r ${{ steps.gh-script-repo.outputs.result }} \ -n ${{ steps.gh-script-issue.outputs.result }} \ - -g ${{ secrets.GH_TOKEN }} + -g ${{ secrets.ONTOBOT_TOKEN }} - name: Clean-up run: rm -rf robot-plugins @@ -104,4 +104,4 @@ jobs: title: ${{ env.PR_TITLE }} base: ${{ github.head_ref }} branch: ${{ env.branch-name }} - # token: ${{ secrets.GH_TOKEN }} + token: ${{ secrets.ONTOBOT_TOKEN }} diff --git a/src/ontology/cl-edit.owl b/src/ontology/cl-edit.owl index ac0dfa122..34d3bba32 100644 --- a/src/ontology/cl-edit.owl +++ b/src/ontology/cl-edit.owl @@ -3023,6 +3023,8 @@ Declaration(Class(obo:CL_4040002)) Declaration(Class(obo:CL_4040003)) Declaration(Class(obo:CL_4040004)) Declaration(Class(obo:CL_4040005)) +Declaration(Class(obo:CL_4040006)) +Declaration(Class(obo:CL_4042001)) Declaration(Class(obo:CL_4042002)) Declaration(Class(obo:CP_0000000)) Declaration(Class(obo:CP_0000025)) @@ -31921,6 +31923,26 @@ AnnotationAssertion(rdfs:label obo:CL_4040005 "mesenchymal stem cell of apical p SubClassOf(obo:CL_4040005 obo:CL_0000134) SubClassOf(obo:CL_4040005 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0003677)) +# Class: obo:CL_4040006 (dermal chromatophore) + +AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:28553007") obo:IAO_0000115 obo:CL_4040006 "A chromatophore that is part of the dermis.") +AnnotationAssertion( obo:CL_4040006 ) +AnnotationAssertion( obo:CL_4040006 "2024-03-07T09:37:14Z"^^xsd:dateTime) +AnnotationAssertion(rdfs:label obo:CL_4040006 "dermal chromatophore") +SubClassOf(obo:CL_4040006 obo:CL_0000147) +SubClassOf(obo:CL_4040006 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0002067)) + +# Class: obo:CL_4042001 (TAC3-positive striatal interneuron) + +AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:34727523") Annotation(oboInOwl:hasDbXref "PMID:32999462") obo:IAO_0000115 obo:CL_4042001 "A GABAergic interneuron that has its soma located in the striatum and that has an enriched expression of the gene TAC3.") +AnnotationAssertion( obo:CL_4042001 ) +AnnotationAssertion( obo:CL_4042001 "2024-03-05T14:29:32Z"^^xsd:dateTime) +AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:34727523") oboInOwl:hasExactSynonym obo:CL_4042001 "TAC3 interneuron") +AnnotationAssertion(rdfs:label obo:CL_4042001 "TAC3-positive striatal interneuron"@en) +SubClassOf(obo:CL_4042001 obo:CL_0011005) +SubClassOf(obo:CL_4042001 ObjectSomeValuesFrom(obo:RO_0002100 obo:UBERON_0002435)) +SubClassOf(obo:CL_4042001 ObjectSomeValuesFrom(obo:RO_0002104 obo:PR_000016004)) + # Class: obo:CL_4042002 (TAC3-positive medium spiny neuron) AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:34727523") obo:IAO_0000115 obo:CL_4042002 "A nucleus accumbens shell and olfactory tubercle D1 medium spiny neuron that co-expresses TAC3 and the DRD1 receptor.")