Releases: ncbi/pgap
2019-11-25.build4172
Fix a problem in Find Best Evidence Alignments affecting some users.
Uses pgap 4.10 code base
2019-11-08.build4137
Additions required for the NCBI Pathogen surveillance effort.
Uses pgap 4.10 code base
2019-10-31.build4124
This release uses an new version of tRNAscan (tRNAscan-SE:2.0.4, Methods Mol Biol. 2019;1962:1-14), and includes our most up-to-date HMM and BlastRule collections for naming proteins.
Uses pgap 4.10 code base.
2019-08-22.build3958
Bug fixes:
- Removed passing bacterial_screening/feats to screen_evaluate: we already analyzed it in fscr_calls_pass1, no need to add unfiltered input from earlier in processing.
- Fixed the problem that was slowing down logging.
- FASTA validation now acknowledges user request to ignore all errors.
- Uses multiprocessor SPARCLBL calculations.
- Uses pgap 4.9 code base
2019-08-01.build3919
Better error handling.
2019-05-13.build3740
Many improvements to the pgap.py interface. Additional features for submitting results.
2019-02-11.build3477
The standalone version is the default supported version with a better user interface.
2018-11-07.build3190
Now includes a standalone version, capable of running entirely within a single docker container.
2018-09-18.build3030, beta release
Our third release, much closer to internal PGAP results.
Include example user_genome directory.
2018-09-10.build3008, beta release
Our second release, now with less silent failures.