build-multi-pex.yml

name: Build elastic-blast PEX files

on: [push, pull_request]

jobs:
  build-single:
    runs-on: ubuntu-latest
    strategy:
      matrix:
        python-version: ["3.9"]

    steps:
      - name: Checkout
        uses: actions/checkout@v3
        with:
          fetch-depth: 0
      - name: Set up Python ${{ matrix.python-version }}
        uses: actions/setup-python@v4
        with:
          python-version: ${{ matrix.python-version }}
      - name: Build PEX file
        run: |
            pip3 install wheel glob2
            pip3 install -r requirements/test.txt
            pex --python-shebang='/usr/bin/env python3' --disable-cache . -r requirements/base.txt --python=python${{ matrix.python-version }} -c elastic-blast -o elastic-blast
            ./elastic-blast --version
            ls -l elastic-blast
            md5sum elastic-blast > elastic-blast.md5
      - name: Create tarball
        run: tar -czvf elastic-blast-no-suffix.tar.gz elastic-blast elastic-blast.md5
      - name: Produce downloadable artifact
        uses: actions/upload-artifact@v3
        with:
          name: elastic-blast-no-suffix
          path: elastic-blast-no-suffix.tar.gz
          retention-days: 1

  build-multiple:
    runs-on: ubuntu-latest
    strategy:
      matrix:
        python-version: ["3.9", "3.10", "3.11"]

    steps:

      - name: Checkout
        uses: actions/checkout@v3
        with:
          fetch-depth: 0
      - name: Set up Python ${{ matrix.python-version }}
        uses: actions/setup-python@v4
        with:
          python-version: ${{ matrix.python-version }}
      - name: Build PEX file
        run: |
            pip3 install wheel glob2
            pip3 install -r requirements/test.txt
            pex --python-shebang='/usr/bin/env python3' --disable-cache . -r requirements/base.txt --python=python${{ matrix.python-version }} -c elastic-blast -o elastic-blast${{ matrix.python-version }}
            ./elastic-blast${{ matrix.python-version }} --version
            ls -l ./elastic-blast${{ matrix.python-version }}
            md5sum elastic-blast${{ matrix.python-version }} > elastic-blast${{ matrix.python-version }}.md5
      - name: Create tarball
        run: tar -czvf elastic-blast${{ matrix.python-version }}.tar.gz elastic-blast${{ matrix.python-version }} elastic-blast${{ matrix.python-version }}.md5
      - name: Produce downloadable artifact
        uses: actions/upload-artifact@v3
        with:
          name: elastic-blast-${{ matrix.python-version }}
          path: elastic-blast${{ matrix.python-version }}.tar.gz
          retention-days: 1

  produce-archive:
    needs: [build-single, build-multiple]
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v3
      - name: Download artifacts
        uses: actions/download-artifact@v3
      - name: Display structure of downloaded files
        run: ls -lR
      - name: Create tarball
        run: |
          tar axvf elastic-blast-no-suffix/elastic-blast-no-suffix.tar.gz
          tar axvf elastic-blast-3.9/elastic-blast3.9.tar.gz
          tar axvf elastic-blast-3.10/elastic-blast3.10.tar.gz
          tar axvf elastic-blast-3.11/elastic-blast3.11.tar.gz
          rm -fvr elastic-blast-*.tar.gz
          tar -czvf ~/elastic-blast.tar.gz elastic-blast elastic-blast*md5 elastic-blast3.*
      - name: 'Upload Artifact'
        uses: actions/upload-artifact@v3
        with:
          name: elastic-blast
          path: ~/elastic-blast.tar.gz