egapx:annot_proc_plane:annot_builder:annot_builder_run: error

[bismarck1008]

[38/06631d] process > egapx:annot_proc_plane:annot_builder:annot_builder_run [100%] 4 of 4, failed: 4, retries: 3 ✘

[79/9b8e63] NOTE: Process egapx:annot_proc_plane:annot_builder:annot_builder_run terminated with an error exit status (3) -- Execution is retried (1)
[cd/7f0c3a] NOTE: Process egapx:annot_proc_plane:annot_builder:annot_builder_run terminated with an error exit status (3) -- Execution is retried (2)
[a5/08981d] NOTE: Process egapx:annot_proc_plane:annot_builder:annot_builder_run terminated with an error exit status (3) -- Execution is retried (3)
ERROR ~ Error executing process > 'egapx:annot_proc_plane:annot_builder:annot_builder_run'

Caused by:
Process egapx:annot_proc_plane:annot_builder:annot_builder_run terminated with an error exit status (3)

Command executed:

mkdir -p outdir/ACCEPT
mkdir -p outdir/COLLECTION
mkdir -p outdir/CONFLICT
mkdir -p outdir/REPORT
mkdir -p outdir/TEST

lds2_indexer -source genome/ -db LDS2

EXCEPTION_STACK_TRACE_LEVEL=Warning DEBUG_STACK_TRACE_LEVEL=Warning DIAG_POST_LEVEL=Trace

annot_builder -accept-output both -nogenbank -lds2 LDS2 -conffile annot_builder_final.ini -gc-assembly gencoll.asn -logfile outdir/annot_builder.log
cat outdir/ACCEPT/*.ftable.annot > outdir/ACCEPT/accept.ftable_annot

Command exit status:
3

Command output:
(empty)

Work dir:
/data/dell/CNI.2024.10.5/2.anotation/temp/38/06631df7dbb3ee5b163f3cc40ed030

Tip: view the complete command output by changing to the process work dir and entering the command cat .command.out

-- Check '15.4_out/nextflow.log' file for details