diff --git a/.github/workflows/codeql-security-scan.yml b/.github/workflows/codeql-security-scan.yml
index e40e85b5..1d020dcd 100644
--- a/.github/workflows/codeql-security-scan.yml
+++ b/.github/workflows/codeql-security-scan.yml
@@ -29,7 +29,7 @@ jobs:
 
     # Initializes the CodeQL tools for scanning.
     - name: Initialize CodeQL
-      uses: github/codeql-action/init@v2
+      uses: github/codeql-action/init@v3
       with:
         languages: ${{ matrix.language }}
         config-file: ./.github/actions/codeql/security-pack.yml
diff --git a/src/fprime/util/commands.py b/src/fprime/util/commands.py
index 68cdcb44..6b0d40d0 100644
--- a/src/fprime/util/commands.py
+++ b/src/fprime/util/commands.py
@@ -59,9 +59,11 @@ def run_info(
             f"'{target}'": "" for target in build_info.get("global_targets", [])
         }
         build_artifacts = (
-            build_info.get("auto_location")
-            if build_info.get("auto_location") is not None
-            else "N/A",
+            (
+                build_info.get("auto_location")
+                if build_info.get("auto_location") is not None
+                else "N/A"
+            ),
             build_info.get("build_dir", "Unknown"),
         )
         local_generic_targets.update(local_targets)
@@ -194,10 +196,10 @@ def run_version_check(
     try:
         import platform
 
-        print(f"Python version: {platform.python_version()}")
         print(f"Operating System: {platform.system()}")
         print(f"CPU Architecture: {platform.machine()}")
         print(f"Platform: {platform.platform()}")
+        print(f"Python version: {platform.python_version()}")
     except ImportError:  # Python >=3.6
         print("[WARNING] Cannot import 'platform'.")
 
@@ -228,9 +230,20 @@ def run_version_check(
         return
 
     print("Pip packages:")
+    # Used to print fprime-fpp-* versions together if they are all the same to de-clutter the output
+    fpp_packages = {}
     for tool in FPRIME_PIP_PACKAGES:
         try:
             version = pkg_resources.get_distribution(tool).version
-            print(f"    {tool}=={version}")
-        except (OSError, VersionException) as exc:
+            if tool.startswith("fprime-fpp-"):
+                fpp_packages[tool] = version
+            else:
+                print(f"    {tool}=={version}")
+        except (OSError, VersionException, pkg_resources.DistributionNotFound) as exc:
             print(f"[WARNING] {exc}")
+    if fpp_packages:
+        if len(set(fpp_packages.values())) == 1:
+            print(f"    fprime-fpp-*=={list(fpp_packages.values())[0]}")
+        else:
+            for tool, version in fpp_packages.items():
+                print(f"    {tool}=={version}")
diff --git a/src/fprime/util/cookiecutter_wrapper.py b/src/fprime/util/cookiecutter_wrapper.py
index bdc558b8..bad9eb0b 100644
--- a/src/fprime/util/cookiecutter_wrapper.py
+++ b/src/fprime/util/cookiecutter_wrapper.py
@@ -1,5 +1,6 @@
 """ Cookie cutter wrapper used to template out components
 """
+
 import glob
 import os
 import shutil
@@ -227,6 +228,13 @@ def new_module(build: Build, parsed_args: "argparse.Namespace"):
 def new_project(parsed_args: "argparse.Namespace"):
     """Creates a new F' project"""
 
+    print(
+        "[DEPRECATED] This command is deprecated and will be removed in a future release."
+        " Please use `fprime-bootstrap project` instead."
+        " Install fprime-bootstrap with `pip install fprime-bootstrap`,"
+        " or refer to https://nasa.github.io/fprime/INSTALL.html"
+    )
+
     # Check if Git is installed and available - needed for cloning F' as submodule
     if not shutil.which("git"):
         print(
diff --git a/src/fprime/util/help_text.py b/src/fprime/util/help_text.py
index 391826f3..ffb74c08 100644
--- a/src/fprime/util/help_text.py
+++ b/src/fprime/util/help_text.py
@@ -282,9 +282,8 @@
 
 Usage:
   -- New Project --
-  Generate a new F' project. This will create a Git repository and add F' as a submodule, optionally creating a new
-  virtual environment. Defaults to current directory, but --path can be used to point to a different location. 
-  Using --overwrite will overwrite only the files that are generated by the new project.
+  Generating a new project is now available through the fprime-bootstrap package. Please see the F´ Install Guide
+  at https://nasa.github.io/fprime/INSTALL.html for instructions on how to install and use fprime-bootstrap.
   -- New Deployment --
   Generate a new F' deployment within a F' project. The new deployment command is expected to be ran at the root of
   the project and will create a new deployment in the current directory. Using --overwrite will overwrite only the