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conda_env.yml
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conda_env.yml
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name: Lung_vessel_segmentation_HRCT
channels:
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=1_llvm
- _pytorch_select=0.1=cpu_0
- absl-py=0.9.0=py36_0
- astor=0.7.1=py_0
- blas=1.0=mkl
- c-ares=1.15.0=h516909a_1001
- ca-certificates=2020.4.5.1=hecc5488_0
- certifi=2020.4.5.1=py36h9f0ad1d_0
- cffi=1.14.0=py36hd463f26_0
- cloudpickle=1.3.0=py_0
- cudatoolkit=9.0=h13b8566_0
- cudnn=7.6.5=cuda9.0_0
- cycler=0.10.0=py_2
- cytoolz=0.10.1=py36h516909a_0
- dask-core=2.14.0=py_0
- dbus=1.13.6=he372182_0
- decorator=4.4.2=py_0
- expat=2.2.9=he1b5a44_2
- fontconfig=2.13.1=he4413a7_1000
- freetype=2.10.1=he06d7ca_0
- gast=0.3.3=py_0
- gettext=0.19.8.1=hc5be6a0_1002
- glib=2.58.3=py36hd3ed26a_1003
- grpcio=1.23.0=py36h769ab6c_1
- gst-plugins-base=1.14.5=h0935bb2_2
- gstreamer=1.14.5=h36ae1b5_2
- h5py=2.10.0=nompi_py36h513d04c_102
- hdf5=1.10.5=nompi_h3c11f04_1104
- icu=58.2=hf484d3e_1000
- imageio=2.5.0=py36_0
- itk=5.0.1=py36_0
- joblib=0.14.1=py_0
- jpeg=9c=h14c3975_1001
- kiwisolver=1.2.0=py36hdb11119_0
- libffi=3.2.1=he1b5a44_1007
- libgcc-ng=9.2.0=h24d8f2e_2
- libgfortran-ng=7.3.0=hdf63c60_5
- libiconv=1.15=h516909a_1006
- libpng=1.6.37=hed695b0_1
- libprotobuf=3.11.4=h8b12597_0
- libstdcxx-ng=9.2.0=hdf63c60_2
- libtiff=4.1.0=hc7e4089_6
- libuuid=2.32.1=h14c3975_1000
- libwebp-base=1.1.0=h516909a_3
- libxcb=1.13=h14c3975_1002
- libxml2=2.9.9=h13577e0_2
- llvm-openmp=9.0.1=hc9558a2_2
- lz4-c=1.8.3=he1b5a44_1001
- markdown=3.2.1=py_0
- matplotlib=3.0.3=py36_0
- matplotlib-base=3.0.3=py36h167e16e_0
- mkl=2019.5=281
- mkl-service=2.3.0=py36h516909a_0
- mkl_fft=1.1.0=py36hc1659b7_1
- mkl_random=1.1.0=py36hb3f55d8_0
- ncurses=6.1=hf484d3e_1002
- networkx=2.4=py_1
- ninja=1.10.0=hc9558a2_0
- numpy=1.16.2=py36h7e9f1db_0
- numpy-base=1.16.2=py36hde5b4d6_0
- olefile=0.46=py_0
- openssl=1.1.1g=h516909a_0
- packaging=20.1=py_0
- pandas=0.25.0=py36hb3f55d8_0
- pcre=8.44=he1b5a44_0
- pillow=5.4.1=py36h00a061d_1000
- pip=20.0.2=py_2
- protobuf=3.11.4=py36h831f99a_1
- pthread-stubs=0.4=h14c3975_1001
- pycparser=2.20=py_0
- pydicom=1.2.2=py_0
- pyparsing=2.4.6=py_0
- pyqt=5.9.2=py36hcca6a23_4
- python=3.6.8=h0371630_0
- python-dateutil=2.8.1=py_0
- python_abi=3.6=1_cp36m
- pytorch=1.0.1=cuda90py36h8b0c50b_0
- pytz=2019.3=py_0
- pywavelets=1.1.1=py36hc1659b7_0
- qt=5.9.7=h52cfd70_2
- readline=7.0=hf8c457e_1001
- scikit-image=0.15.0=py36hb3f55d8_2
- scikit-learn=0.22.1=py36hd81dba3_0
- scipy=1.4.1=py36h0b6359f_0
- setuptools=46.1.3=py36h9f0ad1d_0
- sip=4.19.8=py36hf484d3e_1000
- six=1.14.0=py_1
- sqlite=3.28.0=h8b20d00_0
- tensorboard=1.10.0=py36_0
- tensorboardx=1.6=py_0
- tensorflow=1.10.0=py36_0
- termcolor=1.1.0=py_2
- tifffile=0.15.1=py36h3010b51_1001
- tk=8.6.10=hed695b0_0
- toolz=0.10.0=py_0
- torchvision=0.2.1=py36_1000
- tornado=6.0.4=py36h8c4c3a4_1
- werkzeug=1.0.1=pyh9f0ad1d_0
- wheel=0.34.2=py_1
- xorg-libxau=1.0.9=h14c3975_0
- xorg-libxdmcp=1.1.3=h516909a_0
- xz=5.2.4=h516909a_1002
- zlib=1.2.11=h516909a_1006
- zstd=1.4.4=h3b9ef0a_2
- pip:
- itk-core==5.0.1
- itk-filtering==5.0.1
- itk-numerics==5.0.1
- itk-registration==5.0.1
- itk-segmentation==5.0.1
- nibabel==1.3.0
prefix: /home/moucheng/anaconda3/envs/Lung_vessel_segmentation_HRCT