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Outputs

Reports

reports

Add information here

Quality control

MultiQC
  • MultiQC/name_of_pipeline_run_multiqc_report.html: A graphical and interactive report of various QC steps and results

Pipeline run metrics

pipeline_info

This folder contains the pipeline run metrics

  • pipeline_dag.svg - the workflow graph (only available if GraphViz is installed)
  • pipeline_report.html - the (graphical) summary of all completed tasks and their resource usage
  • pipeline_report.txt - a short summary of this analysis run in text format
  • pipeline_timeline.html - chronological report of compute tasks and their duration
  • pipeline_trace.txt - Detailed trace log of all processes and their various metrics