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setup.py file not found #25

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AnjaliS1 opened this issue Sep 12, 2022 · 3 comments
Open

setup.py file not found #25

AnjaliS1 opened this issue Sep 12, 2022 · 3 comments

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@AnjaliS1
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Screenshot 2022-09-12 142601
Hi, I am currently trying to install scGNN in my jupyter notebook terminal through the command: pip install -e .
However, I got the following error: File setup.py or setup.cfg not found. Directory cannot be installed in editable mode.

So far I had followed the instructions on the github page from source and option 1.
I need this package specifically for GeneLink: https://github.com/zpliulab/GENELink

I was wondering if someone could help me with this installation?

@juexinwang
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Please check Readme.md
pip install -r requirements.txt

@AnjaliS1
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Ah I see. Sorry I thought it had run. Turns out that once I re-ran pip install -r requirements.txt, I then ran into the next error, which is why the module probably could not be found.

ERROR: Could not find a version that satisfies the requirement torch==1.2.0 (from versions: 1.7.0, 1.7.1, 1.8.0, 1.8.1, 1.9.0, 1.9.1, 1.10.0, 1.10.1, 1.10.2)
ERROR: No matching distribution found for torch==1.2.0

@juexinwang
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Try to check the newest version.

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