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jsquaredosquared / novotyper Public

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novotyper

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submit-jobs-with-qsub.sh

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6 lines (6 loc) · 195 Bytes

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novotyper

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submit-jobs-with-qsub.sh

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6 lines (6 loc) · 195 Bytes

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snakemake \

--sdm conda \

--executor cluster-generic \

--cluster-generic-submit-cmd "qsub -V -sync n -cwd -pe slave_pe {threads} -q slave.q -j y -N {rule}" \

--jobs unlimited \

--rerun-incomplete

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