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jnmaloof / rnaseq_simulations Public

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rnaseq_simulations

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STAR.params.2

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7 lines (7 loc) · 282 Bytes

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rnaseq_simulations

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STAR.params.2

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7 lines (7 loc) · 282 Bytes

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runThreadN 12

genomeDir /Network/Servers/avalanche.plb.ucdavis.edu/Volumes/Mammoth/Users/jmaloof/Sequences/ref_genomes/tomato/ITAG2.4_Chromo2.5/STAR_genome

twopassMode Basic

outSAMtype BAM SortedByCoordinate

outSAMunmapped Within

outFilterMismatchNoverLmax 0.1

quantMode GeneCounts

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