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DESCRIPTION
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DESCRIPTION
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Package: jamma
Title: MA-plots for omics data
Version: 0.0.34.900
Authors@R: person("James", "Ward", email="[email protected]", role=c("aut", "cre"))
Description: Create MA-plots with specific control samples,
using sample groups. Volcano plots with hit filtering by gene.
All plots use smooth scatter plots for large number of points.
Depends: R (>= 3.5.0)
Imports: jamba (>= 0.0.104.900),
grDevices,
KernSmooth,
methods,
grDevices,
colorjam,
matrixStats,
ggplot2,
ggh4x
Suggests:
crayon,
knitr,
rmarkdown,
affydata,
ggtext,
testthat (>= 3.0.0)
biocViews:
License: GPL-2
Encoding: UTF-8
LazyData: true
URL: https://github.com/jmw86069/jamma
BugReports: https://github.com/jmw86069/jamma/issues
RoxygenNote: 7.2.3
VignetteBuilder: knitr
Remotes: github::jmw86069/jamba,
github::jmw86069/colorjam
Roxygen: list(markdown=TRUE)
Config/testthat/edition: 3