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gff_rewrite.pl stop in one place and don't move #53

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nienie123123 opened this issue Feb 13, 2023 · 0 comments
Open

gff_rewrite.pl stop in one place and don't move #53

nienie123123 opened this issue Feb 13, 2023 · 0 comments

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@nienie123123
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nienie123123 commented Feb 13, 2023

Hi,

I'm trying to use the "gff_rewrite.pl" to modify my gff generated by Prodigal, but it stay in the conversion process like this:
......
Adding missing gene, transcript and exon based on orphan CDS '2519_1'
Adding missing gene, transcript and exon based on orphan CDS '2520_1'
Adding missing gene, transcript and exon based on orphan CDS '2520_2'

The CDS where I look at gff files in Prodigal is no different from other CDSs.

Does anyone know how to solve this, thank you very much.

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