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FastFold v0.1.0
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@Gy-Lu Gy-Lu released this 23 Aug 09:47
· 66 commits to main since this release
0.1.0
ae44a3b

Overview

Hi, here is FastFold v0.1.0. Compared to the previous version, now you can process the data much faster. Besides, you can use pip install to install FastFold now. If you want to use docker, there is one for you.

Features we have

  1. Excellent kernel performance on GPU platform
  2. Supporting Dynamic Axial Parallelism(DAP)
    • Break the memory limit of single GPU and reduce the overall training time
    • DAP can significantly speed up inference and make ultra-long sequence inference possible
  3. Ease of use
    • Huge performance gains with a few lines changes
    • You don't need to care about how the parallel part is implemented
  4. Faster data processing, about 3x times faster than the original way

Installation ways for you

  1. Build from source
  2. Conda (recommended)
  3. Pypi
  4. Docker

Have a nice trip!

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