diff --git a/SparK.py b/SparK.py index 933ee85..cdc1039 100644 --- a/SparK.py +++ b/SparK.py @@ -301,9 +301,9 @@ def get_region_to_draw(): if width is not None: total_width = int(width) -fills = args['fills'] # left is treat, right is control +fills = args['fills'] # [0] is control, [1] is treatment group if fills is None: - if args['treat_groups'] == []: # color if all tracks are plotted separat + if args['treat_groups'] == []: # color if there is no treat group fills = ["#0000C1", "0"] opacity = 1 elif args['treat_groups'] != []: @@ -312,7 +312,7 @@ def get_region_to_draw(): elif fills[0] == "blue/red": fills = ["#FF1800", "#005CFF"] # right is ctrl blue - opacity = 0.5 + opacity = 0.6 elif fills[0] == "blue/grey": fills = ["#005CFF", "#A3A3A3"] # right is ctrl grey