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Not producing all outputs? #10

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raw937 opened this issue Sep 12, 2016 · 2 comments
Open

Not producing all outputs? #10

raw937 opened this issue Sep 12, 2016 · 2 comments

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@raw937
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raw937 commented Sep 12, 2016

When I use this command:
FGS+ -s Test_contigs.fna -o Test/Tests_contig.faa -w 0 -t complete -p 23 -m 30000

I only produce the .faa file non of the other files.

@raw937
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raw937 commented Oct 18, 2016

FGS+ -s test-contigs.fasta -o test/ -w 1 -t complete -p 24 -m 30000 -e 1 -d 1

-e 1 option should produce the .gff correct? Still not working?
-d 1 option produces an empty .ffn file.
Plus it overwrites the folder so it can't open

@coreymhudson
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This is still an issue. It seems that the version of FGS+ does not allow .ffn files to be created.

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