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Details for CELLxGENE integration/submission #65

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anngvu opened this issue Oct 30, 2023 · 0 comments
Open

Details for CELLxGENE integration/submission #65

anngvu opened this issue Oct 30, 2023 · 0 comments
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anngvu commented Oct 30, 2023 •
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There are some basic things that we can reiterate in this step:

  • What data should look like (usually this is not an issue because processed data is pretty standard format, but doesn't hurt to provide example)
  • Enough clinical data
  • The CELLxGENE template that we use
  • Types of issues encountered in the past
  • General flow of review and implementation, e.g. Team Data Contributor -> Sage DCC staff -> MSK DCC -> CELLxGENE engineers

How much are we able to support an alternative/branch of the workflow to Broad portal? (need to discuss internally).
@cconrad8 cconrad8 self-assigned this Nov 22, 2023
@anngvu anngvu changed the title Spell out more details to keep in mind for CELLxGENE integration, etc. Details for CELLxGENE integration/submission Mar 14, 2024
@anngvu anngvu mentioned this issue Mar 14, 2024
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