diff --git a/doc/modules/to-3.0.0.h b/doc/modules/to-3.0.0.h index 54ec0943a89..eb76178f7ee 100644 --- a/doc/modules/to-3.0.0.h +++ b/doc/modules/to-3.0.0.h @@ -31,7 +31,7 @@ * (Rene Gassmoeller, Menno Fraters, 2024/11/08) * *
  • Added: When using the Geodynamic World Builder, ASPECT will create a file - * called 'original.wb' in the output directory which contains the exact + * called 'original.wb' in the output directory which contains the exact * worldbuilder file used to run the ASPECT model. *
    * (Daniel Douglas, 2024/11/06) @@ -58,7 +58,7 @@ * *
  • Removed: A number of deprecated source code functions and input parameters * have been removed. In particular the deprecated option to specify - * individual material properties in the parameter + * individual material properties in the parameter * 'Postprocess/Visualization/List of output variables' has been removed. * Input files will be automatically fixed and updated * by the update scripts in the directory contrib/utilities. @@ -84,7 +84,7 @@ * (Rene Gassmoeller, 2024/10/08) * *
  • New: The interface for particle property plugins has been updated. - * The new interface can update particles cell-wise and is more efficient. + * The new interface can update particles cell-wise and is more efficient. * In addition, the interface is more extensible for future improvements. * All particle property plugins in ASPECT have been updated, user plugins * will have to be updated accordingly before the support for the now deprecated @@ -176,7 +176,7 @@ * (Timo Heister, 2024/06/18) * *
  • Changed: The particle plugin functions declare_parameters and parse_parameters - * now assume that they are already in the particles subsection. User plugins will + * now assume that they are already in the particles subsection. User plugins will * have to change accordingly. *
    * (Menno Fraters, 2024/06/15) @@ -190,9 +190,9 @@ * (Juliane Dannberg, 2024/06/14) * *
  • Added: A postprocessor 'darcy velocity' that visualizes the fluid - * velocity in models with a compositional field named 'porosity'. - * This postprocessor is independent of the method the porosity is actually - * advected with, i.e. it could be static, advected with the Darcy velocity, + * velocity in models with a compositional field named 'porosity'. + * This postprocessor is independent of the method the porosity is actually + * advected with, i.e. it could be static, advected with the Darcy velocity, * or advected according to the two-phase flow equations. *
    * (Daniel Douglas, 2024/06/13) @@ -214,7 +214,7 @@ *
    * (Juliane Dannberg, 2024/06/10) * - *
  • New: The CPO particle property plugin can now use the Geodynamic + *
  • New: The CPO particle property plugin can now use the Geodynamic * World Builder to set initial grain-sizes and grain orientations *
    * (Menno Fraters, 2024/06/09) @@ -258,7 +258,7 @@ * *
  • New: The CPO particle property plugin set now contains a plugin * which can compute the symmetry decompositions of the elastic - * tensor. There are now also tests which test the whole CPO + * tensor. There are now also tests which test the whole CPO * particle property plugin set. *
    * (Menno Fraters, 2024/06/06) @@ -266,7 +266,7 @@ *
  • New: Added a Rayleigh Taylor instability benchmark with a free surface. * The benchmark was described by Kaus et al. (2010) and reproduced with * ASPECT with different stabilization schemes for the free surface by - * Rose et al. (2017). It can be used to show that the stabilization + * Rose et al. (2017). It can be used to show that the stabilization * scheme implemented by I. Rose allows for larger timesteps, and that * the projection of velocities onto the surface leads to significantly * different topography. @@ -279,16 +279,16 @@ *
    * (Juliane Dannberg, 2024/06/06) * - *
  • New: Added fluid reaction and properties calculations to the + *
  • New: Added fluid reaction and properties calculations to the * Katz2003MantleMelting model in the ReactionModels module. These calculations * were taken from MeltSimple and the model now calls Katz2003MantleMelting. Additionally, - * the katz 2003 option in ReactiveFluidTransport calls these calculations, allowing for - * melting and melt transport to be composited with any material model via ReactiveFluidTransport. + * the katz 2003 option in ReactiveFluidTransport calls these calculations, allowing for + * melting and melt transport to be composited with any material model via ReactiveFluidTransport. *
    * (Grant Block, 2024/06/06) * *
  • New: There is now a python script in the contrib folder that - * creates netcdf files from an input ascii file + * creates netcdf files from an input ascii file * formatted following structured ascii data file convention. *
    * (Arushi Saxena, 2024/06/06) @@ -298,8 +298,8 @@ *
    * (Timo Heister, 2024/06/05) * - *
  • New: There is now a new cookbook based on the - * setup of Allken et al, G3, 2012 which models + *
  • New: There is now a new cookbook based on the + * setup of Allken et al, G3, 2012 which models * rift interaction in 3D brittle-ductile coupled systems. *
    * (Cedric Thieulot, 2024/06/05) @@ -320,20 +320,20 @@ *
    * (Daniel Douglas, 2024/06/05) * - *
  • Fixed: There was a bug in spherical harmonic data reading of S40RTS - * and SAVANI initial temperature models when a maximum degree lower - * than the maximum degree of the spherical harmonic coefficients of - * the data file is specified by users to set up temperature field + *
  • Fixed: There was a bug in spherical harmonic data reading of S40RTS + * and SAVANI initial temperature models when a maximum degree lower + * than the maximum degree of the spherical harmonic coefficients of + * the data file is specified by users to set up temperature field * from spherical harmonic summation. This bug is now fixed. *
    * (Shangxin Liu, 2024/06/04) * *
  • Changed: In S40RTS and SAVANI initial temperature models, the input parameter, * 'Specify a lower maximum order' is changed to 'Specify a lower maximum degree', - * and the input parameter, 'Maximum order' is changed to 'Maximum degree'. + * and the input parameter, 'Maximum order' is changed to 'Maximum degree'. * This avoids confusion because the function of these two parameters is to * allow users to specify a maximum degree lower than the maximum degree - * of the spherical harmonic data file to calculate the temperature field. + * of the spherical harmonic data file to calculate the temperature field. *
    * (Shangxin Liu, 2024/06/04) * @@ -370,7 +370,7 @@ * (Rene Gassmoeller, 2024/06/01) * *
  • Added: Functionality for multiplying the dislocation and/or diffusion creep - * viscosities by prefactors which depend on the model composition. Created a + * viscosities by prefactors which depend on the model composition. Created a * specific use-case for multiplying the viscosity by a factor that accounts for * bound H2O from Hirth & Kohlstaedt 2004 10.1029/138GM06 *
    @@ -432,8 +432,8 @@ * (Bob Myhill, 2024/05/29) * *
  • Changed: A pressure term was added to the Frank Kamenetskii viscous flow law - * in the Visco Plastic material model. The new FK function is given by - * viscosity = A * exp(E * 0.5 * (1.0-(T/ref_T)) + F * (P-ref_P)/(ref_rho*g*h)), + * in the Visco Plastic material model. The new FK function is given by + * viscosity = A * exp(E * 0.5 * (1.0-(T/ref_T)) + F * (P-ref_P)/(ref_rho*g*h)), * where F * (P-ref_P)/(ref_rho*g*h) are the new terms added here. *
    * (Grant Block, 2024/05/29) @@ -585,7 +585,7 @@ *
    * (Juliane Dannberg, 2023/10/01) * - *
  • Added: There is now a prescribed viscosity material model plugin, which can + *
  • Added: There is now a prescribed viscosity material model plugin, which can * overwrite the viscosity of a specified location with a viscosity prescribed * by a function. *
    @@ -674,28 +674,28 @@ *
    * (Maaike Weerdesteijn, 2023/07/14) * - *
  • New: There is now a new material model ('reactive fluid - * transport') that is designed to advect fluids and - * compute fluid release and absorption based on + *
  • New: There is now a new material model ('reactive fluid + * transport') that is designed to advect fluids and + * compute fluid release and absorption based on * different models for fluid-rock interaction. The - * properties of the solid are taken from a - * base material model. + * properties of the solid are taken from a + * base material model. *
    * (John Naliboff, 2023/07/14) * *
  • Fixed: The strain rheology now uses the correct 'old strain' - * when computing the reaction term updates. + * when computing the reaction term updates. *
    * (John Naliboff 2023/07/14) * - *
  • New: There is now a new cookbook which models + *
  • New: There is now a new cookbook which models * the (Poiseuille) flow of the lower crust around a rigid obstacle. *
    * (Cedric Thieulot, 2023/07/13) * *
  • Improved: The initial lithostatic pressure plugin for * boundary tractions now includes the initial topography - * of the reference point into its pressure profile + * of the reference point into its pressure profile * instead of the maximum topography within the domain. *
    * (Anne Glerum, 2023/07/13) @@ -712,13 +712,13 @@ *
  • New: Added a cookbook on how to set up global instantaneous models * based on recent geophysical constraints with a heterogeneous density and * viscosity distribution and weak plate boundaries prescribed using - * different plate boundary configurations. + * different plate boundary configurations. *
    * (Arushi Saxena, Juliane Dannberg, and Rene Gassmoeller 2023/07/13) * - *
  • New: There is now a new cookbook which is a very - * simple subduction initiation model as published - * by Matsumoto and Tomoda (1983). + *
  • New: There is now a new cookbook which is a very + * simple subduction initiation model as published + * by Matsumoto and Tomoda (1983). *
    * (Cedric Thieulot, 2023/07/12) * @@ -735,12 +735,12 @@ *
    * (Rene Gassmoeller, 2023/07/12) * - *
  • New: A cookbook which replicates the model setup of the + *
  • New: A cookbook which replicates the model setup of the * van Keken et al., 2008 2D corner flow subduction benchmark. *
    * (Daniel Douglas, Cedric Thieulot, Wolfgang Bangerth, Max Rudolph, 2023/07/12) * - *
  • New: There is now a new cookbook which models + *
  • New: There is now a new cookbook which models * the deformation of elliptical and rectangular inclusions * in simple shear and pure shear. *
    @@ -753,17 +753,17 @@ *
    * (Wolfgang Bangerth, 2023/07/10) * - *
  • New: The base code for the computation and output of - * Crystal Preferred Orientation (CPO) has been added to - * ASPECT. + *
  • New: The base code for the computation and output of + * Crystal Preferred Orientation (CPO) has been added to + * ASPECT. *
    * (Menno Fraters, 2023/07/09) * - *
  • Changed: The input parameter 'Include viscoelasticity' has been + *
  • Changed: The input parameter 'Include viscoelasticity' has been * removed from the visco_plastic material model. When * 'Enable elasticity' in the Formulation subsection is * switched on, elasticity will automatically be included - * in the visco_plastic material model. + * in the visco_plastic material model. *
    * (Anne Glerum, 2023/07/09) * @@ -785,17 +785,17 @@ * (Haoyuan Li, Bob Myhill, 2023/07/08) * *
  • Fixed: The computation of the upper box origin in the 'box - * with lithosphere boundary indicators' geometry model did not + * with lithosphere boundary indicators' geometry model did not * take into account a nonzero origin. This is fixed now. *
    * (Juliane Dannberg, 2023/07/08) * *
  • Changed: Default field types are now defined by ASPECT * based on Field Names if the types are not defined by the user. - * The logic is as follows: if the name contains the substring stress, - * it has type stress. If the name is equal to + * The logic is as follows: if the name contains the substring stress, + * it has type stress. If the name is equal to * s11, s12, s22, s13, s23, s33, it has type strain. - * If the name is equal to grain_size, porosity, density_field, + * If the name is equal to grain_size, porosity, density_field, * or entropy it has the types grain size, porosity, density or entropy * respectively. Otherwise it has the type chemical composition. *
    @@ -825,12 +825,12 @@ *
  • New: Mesh deformation plugin that uses the landscape * evolution code FastScape to deform the surface through * erosion and sediment deposition. - * + * * Citations: * Neuharth, D., Brune, S., Wrona, T., Glerum, A., Braun, J., & Yuan, X. (2022). Evolution of rift systems and their fault networks in response to surface processes. Tectonics, 41(3), e2021TC007166. - * + * * Neuharth, D., Brune, S., Glerum, A., Morley, C. K., Yuan, X., & Braun, J. (2022). Flexural strike-slip basins. Geology, 50(3), 361-365. - * + * *
    * (Derek Neuharth, Anne Glerum, Sascha Brune, Esther Heckenbach 2023/03/01) *