From d56df9ae8ed6f9779bd4aee6a65d1fe2fca91e3b Mon Sep 17 00:00:00 2001 From: "Eva C. Herbst" <31034865+evaherbst@users.noreply.github.com> Date: Fri, 14 May 2021 10:38:29 +0100 Subject: [PATCH] Update README.md added line and link about ImageJ macro --- README.md | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/README.md b/README.md index 198025f..ead1756 100644 --- a/README.md +++ b/README.md @@ -47,7 +47,10 @@ ____ - If you have any questions about the workflow, or if anything in the guide is unclear, please create an Issue in this github repository or contact me at: eva.herbst *at* pim.uzh.ch ___ - +**Validation** +We also developed an imageJ macro to check "intersection over union" to compare inter-user differences and the effects of manual removal of small inlets. +The imageJ macro can be found [here](https://github.com/evaherbst/Trabecular_Segmentation_Avizo/tree/main/validation) +___ :speech_balloon: *We would be thrilled if other researchers implemented this method in other (especially freeware) programs. The steps can be found in the [Avizo recipe file](https://github.com/evaherbst/Trabecular_Segmentation_Avizo/blob/main/recipe_trabecular_segmentation_Avizo_EH.hxrecipe). If you do so, please get in touch so we can link to your method here!* We thank [Kamel Madi](https://www.linkedin.com/in/kamelmadi/?locale=en_US) for sharing his Avizo expertise with us. We thank the [OATech Network+](https://www.oatechnetwork.org/) for funding our research.