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Initial commit, config, script, help and test_data #98

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Initial commit, config, script, help and test_data

Initial commit, config, script, help and test_data #98

Run time

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Job Run time
run_ci_check_job
2s
list
35s
viash_test (lofreq/lofreq_indelqual, src/lofreq/indelqual/config.vsh.yaml, src/lofreq/indelqual/)
50s
viash_test (lofreq/lofreq_call, src/lofreq/call/config.vsh.yaml, src/lofreq/call/)
1m 46s
viash_test (/featurecounts, src/featurecounts/config.vsh.yaml, src/featurecounts/)
2m 17s
viash_test (/pear, src/pear/config.vsh.yaml, src/pear/)
36s
viash_test (gffread/gffread, src/gffread/config.vsh.yaml, src/gffread/)
36s
viash_test (/bcl_convert, src/bcl_convert/config.vsh.yaml, src/bcl_convert/)
1m 57s
viash_test (star/star_align_reads, src/star/star_align_reads/config.vsh.yaml, src/star/star_align...
4m 17s
viash_test (salmon/salmon_index, src/salmon/salmon_index/config.vsh.yaml, src/salmon/salmon_index/)
56s
viash_test (salmon/salmon_quant, src/salmon/salmon_quant/config.vsh.yaml, src/salmon/salmon_quant/)
2m 5s
viash_test (/fastp, src/fastp/config.vsh.yaml, src/fastp/)
42s
viash_test (/bgzip, src/bgzip/config.vsh.yaml, src/bgzip/)
45s
viash_test (/falco, src/falco/config.vsh.yaml, src/falco/)
1m 12s
viash_test (samtools/samtools_fastq, src/samtools/samtools_fastq/config.vsh.yaml, src/samtools/sa...
1m 50s
viash_test (samtools/samtools_stats, src/samtools/samtools_stats/config.vsh.yaml, src/samtools/sa...
46s
viash_test (samtools/samtools_index, src/samtools/samtools_index/config.vsh.yaml, src/samtools/sa...
45s
viash_test (samtools/samtools_flagstat, src/samtools/samtools_flagstat/config.vsh.yaml, src/samto...
1m 43s
viash_test (samtools/samtools_idxstats, src/samtools/samtools_idxstats/config.vsh.yaml, src/samto...
1m 46s
viash_test (samtools/samtools_faidx, src/samtools/samtools_faidx/config.vsh.yaml, src/samtools/sa...
2m 39s
viash_test (samtools/samtools_sort, src/samtools/samtools_sort/config.vsh.yaml, src/samtools/samt...
1m 9s
viash_test (/arriba, src/arriba/config.vsh.yaml, src/arriba/)
3m 4s
viash_test (busco/busco_list_datasets, src/busco/busco_list_datasets/config.vsh.yaml, src/busco/b...
3m 49s
viash_test (busco/busco_run, src/busco/busco_run/config.vsh.yaml, src/busco/busco_run/)
8m 19s
viash_test (busco/busco_download_datasets, src/busco/busco_download_datasets/config.vsh.yaml, src...
2m 0s
viash_test (/multiqc, src/multiqc/config.vsh.yaml, src/multiqc/)
3m 10s
49m 36s