feat: an initial client implementation of GA4GH ServiceInfo and TES APIs as a library #58
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| name: CI | |
| on: [push, pull_request] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| container: | |
| image: ubuntu:20.04 | |
| env: | |
| OPENSSL_DIR: /usr/include/openssl | |
| OPENSSL_LIB_DIR: /usr/lib/x86_64-linux-gnu | |
| OPENSSL_INCLUDE_DIR: /usr/include/openssl | |
| steps: | |
| - name: Cache Rust dependencies | |
| uses: actions/cache@v2 | |
| with: | |
| path: ~/.cargo | |
| key: ${{ runner.os }}-cargo-${{ hashFiles('**/Cargo.lock') }} | |
| restore-keys: ${{ runner.os }}-cargo- | |
| - name: Cache Rust build output | |
| uses: actions/cache@v2 | |
| with: | |
| path: target | |
| key: ${{ runner.os }}-build-${{ hashFiles('**/Cargo.lock') }} | |
| restore-keys: ${{ runner.os }}-build- | |
| - name: Cache Node.js dependencies | |
| uses: actions/cache@v2 | |
| with: | |
| path: ~/.npm | |
| key: ${{ runner.os }}-node-${{ hashFiles('**/package-lock.json') }} | |
| restore-keys: ${{ runner.os }}-node- | |
| - name: Cache Maven dependencies | |
| uses: actions/cache@v2 | |
| with: | |
| path: ~/.m2/repository | |
| key: ${{ runner.os }}-maven-${{ hashFiles('**/pom.xml') }} | |
| restore-keys: ${{ runner.os }}-maven- | |
| - name: Cache Go modules | |
| uses: actions/cache@v2 | |
| with: | |
| path: ~/.cache/go-build | |
| key: ${{ runner.os }}-go-${{ hashFiles('**/go.sum') }} | |
| restore-keys: ${{ runner.os }}-go- | |
| - name: Cache Funnel dependencies | |
| uses: actions/cache@v2 | |
| with: | |
| path: ~/funnel/build | |
| key: ${{ runner.os }}-funnel-${{ hashFiles('**/funnel/*') }} | |
| restore-keys: ${{ runner.os }}-funnel- | |
| - name: Install Rust | |
| run: | | |
| apt-get update | |
| apt-get install -y curl git build-essential libssl-dev | |
| if ! command -v rustup &> /dev/null # might not be installed while executing using `act` | |
| then | |
| curl --proto '=https' --tlsv1.2 -sSf https://sh.rustup.rs | sh -s -- -y | |
| . $HOME/.cargo/env | |
| fi | |
| rustup update stable | |
| - name: Install Node.js # required for build-models.sh | |
| run: | | |
| REQUIRED_NODE_VERSION=22 | |
| if command -v node &> /dev/null; then | |
| curl -fsSL https://deb.nodesource.com/setup_22.x -o nodesource_setup.sh | |
| bash nodesource_setup.sh | |
| apt-get install -y nodejs | |
| fi | |
| - name: Set up JDK 11 # required for build-models.sh | |
| uses: actions/setup-java@v2 | |
| with: | |
| distribution: 'adopt' | |
| java-version: '11' | |
| - name: Install Go | |
| uses: actions/setup-go@v2 | |
| with: | |
| go-version: '^1.22' | |
| - name: Install Funnel | |
| run: | | |
| if [ -d "funnel" ]; then rm -Rf funnel; fi | |
| git clone https://github.com/ohsu-comp-bio/funnel.git | |
| cd funnel && make && make install && cd .. | |
| - uses: actions/checkout@v2 # checkout the repository | |
| - name: Build models | |
| run: | | |
| . $HOME/.cargo/env | |
| bash ./build-models.sh | |
| - name: Build | |
| run: | | |
| . $HOME/.cargo/env | |
| cargo build --verbose | |
| - name: Run tests | |
| run: | | |
| . $HOME/.cargo/env | |
| bash ./run-tests.sh | |
| - name: Lint | |
| run: | | |
| . $HOME/.cargo/env | |
| cargo clippy -- -D warnings | |
| - name: Format | |
| run: | | |
| . $HOME/.cargo/env | |
| # rustup install nightly – fails for some reason | |
| # rustup default nightly | |
| cargo fmt -- ./lib/src/serviceinfo/models/*.rs # workaround to fix autogenerated code formatting | |
| cargo fmt -- ./lib/src/tes/models/*.rs | |
| cargo fmt -- --check # --config-path ./rustfmt.toml |