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Also: automatically check validity of raw data, e.g., confirm that files are readable and (possibly) in valid fastq format (issue with the latter is that, depending on the software we use and the age of the dataset, header lines that are valid fastq may not be recognized by the software)
Should check that linked files have:
mock-forward-read.fastq.[gz|zip]
,mock-reverse-read.fastq.[gz|zip]
,mock-index-read.fastq.[gz|zip]
forward
andindex
files (reverse
is optional)The text was updated successfully, but these errors were encountered: