From a46b7a4bc19ff76afc546dee28fa1dbe9dfe605a Mon Sep 17 00:00:00 2001
From: Shaun Jackman <sjackman@gmail.com>
Date: Mon, 10 Jan 2022 16:07:57 -0800
Subject: [PATCH] bandage 0.9.0

Use the AppDir.
---
 Formula/bandage.rb | 29 +++++++++++++++--------------
 1 file changed, 15 insertions(+), 14 deletions(-)

diff --git a/Formula/bandage.rb b/Formula/bandage.rb
index 7aff8fd8c..0fe9fd178 100644
--- a/Formula/bandage.rb
+++ b/Formula/bandage.rb
@@ -2,34 +2,35 @@ class Bandage < Formula
   # cite Wick_2015: "https://doi.org/10.1093/bioinformatics/btv383"
   desc "Bioinf App for Navigating De novo Assembly Graphs Easily"
   homepage "https://rrwick.github.io/Bandage/"
-  url "https://github.com/rrwick/Bandage/releases/download/v0.8.1/Bandage_Ubuntu_dynamic_v0_8_1.zip"
-  sha256 "2e8332e59b95438040a1b0ad29b3730ac63d7c638c635aeddde4789bf7a3116c"
-  license "GPL-3.0"
+  url "https://github.com/rrwick/Bandage/releases/download/v0.9.0/Bandage_Ubuntu-x86-64_v0.9.0_AppDir.zip"
+  version "0.9.0"
+  sha256 "0364ecec8dff520197e4bb10678ebbfebd83c7a1d0ed4976c7415a4bc8453527"
+  license "GPL-3.0-only"
 
   bottle do
     root_url "https://ghcr.io/v2/brewsci/bio"
     sha256 cellar: :any_skip_relocation, x86_64_linux: "2f9db41fa2cc366255bc4cf5d58db949f0765db087021adf6d701a44b4a2f6ab"
   end
 
+  depends_on "patchelf" => :build
+  depends_on "fontconfig"
+  depends_on "freetype"
   depends_on :linux
-  depends_on "qt"
-  depends_on "patchelf" => :build unless OS.mac?
+  depends_on "mesa"
 
   uses_from_macos "zlib"
 
   def install
-    bin.install "Bandage"
-    unless OS.mac?
-      system "patchelf",
-        "--set-interpreter", HOMEBREW_PREFIX/"lib/ld.so",
-        "--set-rpath", HOMEBREW_PREFIX/"lib:#{Formula["qt"].opt_lib}",
-        bin/"Bandage"
-    end
+    prefix.install "Bandage_Ubuntu-x86-64_v#{version}/usr"
+    bin.install_symlink prefix/"usr/bin/bandage"
     pkgshare.install "sample_LastGraph"
-    doc.install "dependencies"
+    system "patchelf",
+      "--set-interpreter", HOMEBREW_PREFIX/"lib/ld.so",
+      "--set-rpath", "$ORIGIN/../lib:#{HOMEBREW_PREFIX}/lib",
+      bin/"bandage"
   end
 
   test do
-    assert_match "Usage", shell_output("#{bin}/Bandage --help")
+    assert_match "Usage", shell_output("#{bin}/bandage --help")
   end
 end