From 3bf7b86b44e6479e01a95069c36cada89bc6312d Mon Sep 17 00:00:00 2001 From: Rich Abdill Date: Wed, 24 Apr 2019 13:42:08 -0500 Subject: [PATCH] Pulling in latest versions of Bioconductor, dada2 --- Dockerfile | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/Dockerfile b/Dockerfile index 564dc95..28b841b 100644 --- a/Dockerfile +++ b/Dockerfile @@ -1,4 +1,4 @@ -FROM bioconductor/release_core2 +FROM bioconductor/release_core2:20190418 LABEL org.label-schema.schema-version = "1.0.0-rc.1" @@ -10,8 +10,8 @@ LABEL org.label-schema.url = "https://benjjneb.github.io/dada2/" LABEL maintainer="rabdill@umn.edu" # this "version" label reflects the installed version of DADA2: -LABEL org.label-schema.version = "1.8.0" +LABEL org.label-schema.version = "1.10.1" -RUN R -e 'source("https://bioconductor.org/biocLite.R"); biocLite("dada2")' +RUN R -e 'BiocManager::install("dada2", version="3.8", update=TRUE, ask=FALSE)' CMD ["R"]