Pulling in latest versions of Bioconductor, dada2

blekhmanlab · Apr 24, 2019 · 3bf7b86 · 3bf7b86
1 parent 3e8c469
commit 3bf7b86
Showing 1 changed file with 3 additions and 3 deletions.
diff --git a/Dockerfile b/Dockerfile
@@ -1,4 +1,4 @@
-FROM bioconductor/release_core2
+FROM bioconductor/release_core2:20190418
 
 LABEL org.label-schema.schema-version = "1.0.0-rc.1"
 
@@ -10,8 +10,8 @@ LABEL org.label-schema.url = "https://benjjneb.github.io/dada2/"
 LABEL maintainer="[email protected]"
 
 # this "version" label reflects the installed version of DADA2:
-LABEL org.label-schema.version = "1.8.0"
+LABEL org.label-schema.version = "1.10.1"
 
-RUN R -e 'source("https://bioconductor.org/biocLite.R"); biocLite("dada2")'
+RUN R -e 'BiocManager::install("dada2", version="3.8", update=TRUE, ask=FALSE)'
 
 CMD ["R"]