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@biosustain

DTU Biosustain

The Novo Nordisk Foundation Center for Biosustainability

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  1. potion potion Public

    Flask-Potion is a RESTful API framework for Flask and SQLAlchemy, Peewee or MongoEngine

    Python 488 51

  2. cameo cameo Public

    cameo - computer aided metabolic engineering & optimization

    Python 114 44

  3. shu shu Public

    Multi-dimensional, trans-omics metabolic maps.

    Rust 44 1

  4. croissance croissance Public

    Tool for estimating growth rates from microbial growth curves

    Python 28 13

  5. Maud Maud Public

    Enzyme models that take into account kinetics, allostery and thermodynamics

    Python 27 2

  6. snakemake_UmetaFlow snakemake_UmetaFlow Public

    Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake

    Python 24 7

Repositories

Showing 10 of 123 repositories
  • pankb Public

    The Pangenome Knowledge Base (PanKB) serves as an up-to-date resource for pangenomics research methods and the dissemination of results and currently offers basic pangenome characteristics and advanced pangenome analytics for 8 major biotech bacteria families.

    biosustain/pankb’s past year of commit activity
    HTML 1 MIT 0 0 0 Updated Nov 28, 2024
  • pankb_data_prep Public
    biosustain/pankb_data_prep’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Nov 28, 2024
  • dsp_pandas Public

    Organize pandas based functionality across projects.

    biosustain/dsp_pandas’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Nov 28, 2024
  • pseudobatch Public

    The Pseudobatch transformation is a method to easy analysis of measurement from a fed-batch fermentation process. After transformation, the data can be analysed as if it was obtained from a batch fermentation process. The Pseudobatch transformation is especially useful for fed-batch processes where samples where drawn from the bioreactor.

    biosustain/pseudobatch’s past year of commit activity
    Jupyter Notebook 6 MIT 0 3 0 Updated Nov 28, 2024
  • dsp_nextflow_training Public

    Hands-on Nextflow training materials and information

    biosustain/dsp_nextflow_training’s past year of commit activity
    Python 2 GPL-3.0 0 1 0 Updated Nov 26, 2024
  • salb_imodulons Public
    biosustain/salb_imodulons’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Nov 25, 2024
  • snakemake_UmetaFlow Public

    Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake

    biosustain/snakemake_UmetaFlow’s past year of commit activity
    Python 24 Apache-2.0 7 2 1 Updated Nov 25, 2024
  • dsp_notes Public

    Public notes and hints of the Data Science Platform.

    biosustain/dsp_notes’s past year of commit activity
    Jupyter Notebook 1 1 0 2 Updated Nov 22, 2024
  • dsp_workshop_datavizR Public

    Workshop Data Science

    biosustain/dsp_workshop_datavizR’s past year of commit activity
    HTML 1 0 0 0 Updated Nov 20, 2024
  • git-tutorial Public Forked from RasmussenLab/git-tutorial

    VS Code on Binder

    biosustain/git-tutorial’s past year of commit activity
    Python 3 BSD-3-Clause 67 2 0 Updated Nov 14, 2024
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