From b9fe77f42f4171514a1e4566cee06380ae0c00f9 Mon Sep 17 00:00:00 2001 From: Yozen Hernandez Date: Tue, 27 Feb 2024 12:05:47 -0500 Subject: [PATCH] Update README.md Added conda/mamba install instructions --- README.md | 14 ++++++++++++++ 1 file changed, 14 insertions(+) diff --git a/README.md b/README.md index 0d6978f..76a9dde 100644 --- a/README.md +++ b/README.md @@ -66,6 +66,20 @@ So something like "sudo su -" followed by cpan or cpanm probably would work bett If this is intended to be installed only for one person, better in my opinion would be for the user to install her/his own Perl rather than use the system Perl using Perlbrew and not use sudo su or root at all. +# Install using Conda/Mamba + +bpwrapper is available as a package on [Bioconda](https://bioconda.github.io/). First, follow the directions on adding the Bioconda repository. Then, using either `conda` (or [`mamba`](https://mamba.readthedocs.io/en/latest/installation/mamba-installation.html)) install: + +``` +conda install -n bpwrapper perl-bio-bpwrapper +``` + +or + +``` +mamba install -n bpwrapper perl-bio-bpwrapper +``` + # Install and run from docker Use the bpwrapper docker image. It includes `bioaln`, `biopop`, `bioseq`, and `biotree`.