From 12ceccfb35a14ad02dc9bc23d7732b07ea549688 Mon Sep 17 00:00:00 2001
From: Paul-B98 <115164840+Paul-B98@users.noreply.github.com>
Date: Sun, 27 Oct 2024 21:04:47 +0100
Subject: [PATCH] add eicu dosage concepts

---
 conceptbase/concepts/Adrenaline_dosage.yml    | 20 +++++++++++++++++--
 conceptbase/concepts/Dobutamine_dosage.yml    | 12 +++++++++--
 .../concepts/Norepinephrine_dosage.yml        | 12 +++++++++--
 conceptbase/concepts/Vancomycine_dosage.yml   | 12 +++++++++--
 conceptbase/concepts/Vasopressine_dosage.yml  | 12 +++++++++--
 5 files changed, 58 insertions(+), 10 deletions(-)

diff --git a/conceptbase/concepts/Adrenaline_dosage.yml b/conceptbase/concepts/Adrenaline_dosage.yml
index 7892829..75789b3 100644
--- a/conceptbase/concepts/Adrenaline_dosage.yml
+++ b/conceptbase/concepts/Adrenaline_dosage.yml
@@ -1,5 +1,5 @@
 name: Adrenaline_dosage
-unit: ug/kg/min
+unit: mcg  # TODO Fix
 description: ''
 identifiers:
   loinc: ''
@@ -15,4 +15,20 @@ mapper:
     schema: mimiciv_icu
     table: inputevents
   source: mimiciv
-  unit: mg/time
+  unit: mcg  # TODO Fix should be ml
+- klass: EICUInfusionDosageMapper
+  params:
+    constraints:
+      drugname: EPINEPHrine(Adrenalin)STD 4 mg Sodium Chloride 0.9% 250 ml (mcg/min)
+    schema: eicu_crd
+    table: infusiondrug
+  source: eicu
+  unit: mcg
+- klass: EICUInfusionDosageMapper
+  params:
+    constraints:
+      drugname: EPINEPHrine(Adrenalin)MAX 30 mg Sodium Chloride 0.9% 250 ml (mcg/min
+    schema: eicu_crd
+    table: infusiondrug
+  source: eicu
+  unit: mcg
diff --git a/conceptbase/concepts/Dobutamine_dosage.yml b/conceptbase/concepts/Dobutamine_dosage.yml
index c2b56ee..088e517 100644
--- a/conceptbase/concepts/Dobutamine_dosage.yml
+++ b/conceptbase/concepts/Dobutamine_dosage.yml
@@ -1,5 +1,5 @@
 name: Dobutamine_dosage
-unit: ug/kg/min
+unit: mcg  # TODO Fix
 description: ''
 identifiers:
   loinc: ''
@@ -15,4 +15,12 @@ mapper:
     schema: mimiciv_icu
     table: inputevents
   source: mimiciv
-  unit: mg/time
+  unit: mcg  # TODO Fix
+- klass: EICUInfusionDosageMapper
+  params:
+    constraints:
+      drugname: Dobutamine (mcg/kg/min
+    schema: eicu_crd
+    table: infusiondrug
+  source: eicu
+  unit: mcg
diff --git a/conceptbase/concepts/Norepinephrine_dosage.yml b/conceptbase/concepts/Norepinephrine_dosage.yml
index 3b2e03d..21728ac 100644
--- a/conceptbase/concepts/Norepinephrine_dosage.yml
+++ b/conceptbase/concepts/Norepinephrine_dosage.yml
@@ -1,5 +1,5 @@
 name: Norepinephrine_dosage
-unit: ug/kg/min
+unit: mcg  # TODO Fix
 description: ''
 identifiers:
   loinc: ''
@@ -15,4 +15,12 @@ mapper:
     schema: mimiciv_icu
     table: inputevents
   source: mimiciv
-  unit: mg/time
+  unit: mcg  # TODO Fix
+- klass: EICUInfusionDosageMapper
+  params:
+    constraints:
+      drugname: Norepinephrine (mcg/min)
+    schema: eicu_crd
+    table: infusiondrug
+  source: eicu
+  unit: mcg
diff --git a/conceptbase/concepts/Vancomycine_dosage.yml b/conceptbase/concepts/Vancomycine_dosage.yml
index d0660fa..a44bbb6 100644
--- a/conceptbase/concepts/Vancomycine_dosage.yml
+++ b/conceptbase/concepts/Vancomycine_dosage.yml
@@ -1,5 +1,5 @@
 name: Vancomycine_dosage
-unit: mg
+unit: mcg  # TODO Fix
 description: ''
 identifiers:
   loinc: ''
@@ -15,4 +15,12 @@ mapper:
     schema: mimiciv_icu
     table: inputevents
   source: mimiciv
-  unit: mg
+  unit: mcg  # TODO Fix
+- klass: EICUInfusionDosageMapper
+  params:
+    constraints:
+      drugname: Vancomycin (ml/hr)
+    schema: eicu_crd
+    table: infusiondrug
+  source: eicu
+  unit: mcg
diff --git a/conceptbase/concepts/Vasopressine_dosage.yml b/conceptbase/concepts/Vasopressine_dosage.yml
index 0fca426..1d88adb 100644
--- a/conceptbase/concepts/Vasopressine_dosage.yml
+++ b/conceptbase/concepts/Vasopressine_dosage.yml
@@ -1,5 +1,5 @@
 name: Vasopressine_dosage
-unit: IE/kg/min
+unit: unit  # TODO Fix
 description: ''
 identifiers:
   loinc: ''
@@ -15,4 +15,12 @@ mapper:
     schema: mimiciv_icu
     table: inputevents
   source: mimiciv
-  unit: IE/time
+  unit: unit  # TODO Fix
+- klass: EICUInfusionDosageMapper
+  params:
+    constraints:
+      drugname: Vasopressin (units/min)
+    schema: eicu_crd
+    table: infusiondrug
+  source: eicu
+  unit: unit