impossible to install on x86 (mongodb fails)

[ndx1905-github]

Describe the bug

Installation script fails

Context

• Hardware: oracle vm with x86
• YunoHost version: 11.2.3 stable
• I have access to my server: *Through SSH
• Are you in a special context or did you perform some particular tweaking on your YunoHost instance?: *no *

Steps to reproduce

• installation through web or through cli
  sudo yunohost app install overleaf

Logs

Info: Installing overleaf...
Info: [+...................] > Validating installation parameters...
Info: [#+..................] > Storing installation settings...
Info: [##+.................] > Finding an available port...
Info: [###+................] > Installing dependencies...
Warning: update-language: texlive-base not installed and configured, doing nothing!
Warning: Running updmap-sys. This may take some time... done.
Warning: Running mktexlsr /var/lib/texmf ... done.
Warning: Building format(s) --all.
Warning: This may take some time... done.
Info: Installing MongoDB...
Info: Installing MongoDB Community Edition...
Warning: (this may take some time)
Warning: The service mongod didn't fully executed the action restart before the timeout.
Warning: Please find here an extract of the end of the log of the service mongod:
Warning: Aug 22 05:10:17 systemd[1]: Started MongoDB Database Server.
Warning: Aug 22 05:10:19 mongod[2052904]: {"t":{"$date":"2023-08-22T05:10:19.074Z"},"s":"I", "c":"CONTROL", "id":7484500, "ctx":"-","msg":"Environment variable MONGODB_CONFIG_OVERRIDE_NOFORK == 1, overriding "processManagement.fork" to false"}
Warning: Aug 22 05:10:21 systemd[1]: mongod.service: Main process exited, code=exited, status=62/n/a
Warning: Aug 22 05:10:21 systemd[1]: mongod.service: Failed with result 'exit-code'.
Warning: Aug 22 05:10:21 systemd[1]: mongod.service: Consumed 1.039s CPU time.
Warning: Aug 22 05:40:44 systemd[1]: Started MongoDB Database Server.
Warning: Aug 22 05:40:46 mongod[2064065]: {"t":{"$date":"2023-08-22T05:40:46.129Z"},"s":"I", "c":"CONTROL", "id":7484500, "ctx":"-","msg":"Environment variable MONGODB_CONFIG_OVERRIDE_NOFORK == 1, overriding "processManagement.fork" to false"}
Warning: Aug 22 05:40:48 systemd[1]: mongod.service: Main process exited, code=exited, status=62/n/a
Warning: Aug 22 05:40:48 systemd[1]: mongod.service: Failed with result 'exit-code'.
Warning: Aug 22 05:40:48 systemd[1]: mongod.service: Consumed 1.114s CPU time.
Warning: Aug 22 05:47:58 systemd[1]: Started MongoDB Database Server.
Warning: Aug 22 05:48:02 mongod[515]: {"t":{"$date":"2023-08-22T05:48:02.971Z"},"s":"I", "c":"CONTROL", "id":7484500, "ctx":"-","msg":"Environment variable MONGODB_CONFIG_OVERRIDE_NOFORK == 1, overriding "processManagement.fork" to false"}
Warning: Aug 22 05:48:09 systemd[1]: mongod.service: Main process exited, code=exited, status=62/n/a
Warning: Aug 22 05:48:09 systemd[1]: mongod.service: Failed with result 'exit-code'.
Warning: Aug 22 05:48:09 systemd[1]: mongod.service: Consumed 1.183s CPU time.
Warning: Aug 22 06:04:06 systemd[1]: Started MongoDB Database Server.
Warning: Aug 22 06:04:07 mongod[9006]: {"t":{"$date":"2023-08-22T06:04:07.258Z"},"s":"I", "c":"CONTROL", "id":7484500, "ctx":"-","msg":"Environment variable MONGODB_CONFIG_OVERRIDE_NOFORK == 1, overriding "processManagement.fork" to false"}
Warning: Aug 22 06:04:09 systemd[1]: mongod.service: Main process exited, code=exited, status=62/n/a
Warning: Aug 22 06:04:09 systemd[1]: mongod.service: Failed with result 'exit-code'.
Warning: Aug 22 06:04:09 systemd[1]: mongod.service: Consumed 1.352s CPU time.
Warning: ---
Warning: {"t":{"$date":"2023-08-22T06:04:09.015+00:00"},"s":"I", "c":"CONTROL", "id":4784925, "ctx":"initandlisten","msg":"Shutting down free monitoring"}
Warning: {"t":{"$date":"2023-08-22T06:04:09.015+00:00"},"s":"I", "c":"CONTROL", "id":4784927, "ctx":"initandlisten","msg":"Shutting down the HealthLog"}
Warning: {"t":{"$date":"2023-08-22T06:04:09.015+00:00"},"s":"I", "c":"CONTROL", "id":4784928, "ctx":"initandlisten","msg":"Shutting down the TTL monitor"}
Warning: {"t":{"$date":"2023-08-22T06:04:09.015+00:00"},"s":"I", "c":"CONTROL", "id":6278511, "ctx":"initandlisten","msg":"Shutting down the Change Stream Expired Pre-images Remover"}
Warning: {"t":{"$date":"2023-08-22T06:04:09.015+00:00"},"s":"I", "c":"CONTROL", "id":4784929, "ctx":"initandlisten","msg":"Acquiring the global lock for shutdown"}
Warning: {"t":{"$date":"2023-08-22T06:04:09.015+00:00"},"s":"I", "c":"CONTROL", "id":4784930, "ctx":"initandlisten","msg":"Shutting down the storage engine"}
Warning: {"t":{"$date":"2023-08-22T06:04:09.015+00:00"},"s":"I", "c":"STORAGE", "id":22320, "ctx":"initandlisten","msg":"Shutting down journal flusher thread"}
Warning: {"t":{"$date":"2023-08-22T06:04:09.015+00:00"},"s":"I", "c":"STORAGE", "id":22321, "ctx":"initandlisten","msg":"Finished shutting down journal flusher thread"}
Warning: {"t":{"$date":"2023-08-22T06:04:09.015+00:00"},"s":"I", "c":"STORAGE", "id":22322, "ctx":"initandlisten","msg":"Shutting down checkpoint thread"}
Warning: {"t":{"$date":"2023-08-22T06:04:09.015+00:00"},"s":"I", "c":"STORAGE", "id":22323, "ctx":"initandlisten","msg":"Finished shutting down checkpoint thread"}
Warning: {"t":{"$date":"2023-08-22T06:04:09.015+00:00"},"s":"I", "c":"STORAGE", "id":20282, "ctx":"initandlisten","msg":"Deregistering all the collections"}
Warning: {"t":{"$date":"2023-08-22T06:04:09.015+00:00"},"s":"I", "c":"STORAGE", "id":22317, "ctx":"initandlisten","msg":"WiredTigerKVEngine shutting down"}
Warning: {"t":{"$date":"2023-08-22T06:04:09.016+00:00"},"s":"I", "c":"STORAGE", "id":22318, "ctx":"initandlisten","msg":"Shutting down session sweeper thread"}
Warning: {"t":{"$date":"2023-08-22T06:04:09.016+00:00"},"s":"I", "c":"STORAGE", "id":22319, "ctx":"initandlisten","msg":"Finished shutting down session sweeper thread"}
Warning: {"t":{"$date":"2023-08-22T06:04:09.016+00:00"},"s":"I", "c":"STORAGE", "id":4795902, "ctx":"initandlisten","msg":"Closing WiredTiger","attr":{"closeConfig":"leak_memory=true,"}}
Warning: {"t":{"$date":"2023-08-22T06:04:09.093+00:00"},"s":"I", "c":"STORAGE", "id":4795901, "ctx":"initandlisten","msg":"WiredTiger closed","attr":{"durationMillis":77}}
Warning: {"t":{"$date":"2023-08-22T06:04:09.094+00:00"},"s":"I", "c":"STORAGE", "id":22279, "ctx":"initandlisten","msg":"shutdown: removing fs lock..."}
Warning: {"t":{"$date":"2023-08-22T06:04:09.094+00:00"},"s":"I", "c":"-", "id":4784931, "ctx":"initandlisten","msg":"Dropping the scope cache for shutdown"}
Warning: {"t":{"$date":"2023-08-22T06:04:09.094+00:00"},"s":"I", "c":"CONTROL", "id":20565, "ctx":"initandlisten","msg":"Now exiting"}
Warning: {"t":{"$date":"2023-08-22T06:04:09.094+00:00"},"s":"I", "c":"CONTROL", "id":23138, "ctx":"initandlisten","msg":"Shutting down","attr":{"exitCode":62}}
Info: [####+...............] > Configuring system user...
Info: [#####+..............] > Creating a MongoDB database...
Warning: ynh_mongo_db: line 96: mongo: command not found
Error: Unable to install overleaf: An error occurred inside the app installation script
Info: The operation 'Install the 'overleaf' app' could not be completed. Please share the full log of this operation using the command 'yunohost log share 20230822-060227-app_install-overleaf' to get help
Warning: Here's an extract of the logs before the crash. It might help debugging the error:
Info: DEBUG - + db_pwd=**********
Info: DEBUG - + ynh_mongo_create_user --db_user=overleaf --db_pwd=********** --db_name=overleaf
Info: DEBUG - + ynh_mongo_exec --database=overleaf '--command=db.createUser( { user: "overleaf", pwd: "**********", roles: [ { role: "readWrite", db: "overleaf" } ] } );'
Info: DEBUG - + user=
Info: DEBUG - + password=
Info: DEBUG - + authenticationdatabase=
Info: DEBUG - + database=overleaf
Info: DEBUG - + host=
Info: DEBUG - + port=
Info: DEBUG - + eval=0
Info: DEBUG - + '[' -n '' ']'
Info: DEBUG - + password=
Info: DEBUG - + authenticationdatabase=
Info: DEBUG - + '[' -n '' ']'
Info: DEBUG - + '[' -n '' ']'
Info: DEBUG - + '[' -n overleaf ']'
Info: DEBUG - + database='use overleaf'
Info: DEBUG - + mongo --quiet
Info: WARNING - ynh_mongo_db: line 96: mongo: command not found
Info: DEBUG - + ynh_exit_properly
Warning: Removing the app after installation failure...
Info: [....................] > Loading installation settings...
Info: [+...................] > Stopping and removing the systemd service...
Info: [#+..................] > Removing logrotate configuration...
Info: [##+.................] > Removing the MongoDB database...
Warning: ynh_mongo_db: line 110: mongo: command not found
Warning: ynh_mongo_db: line 198: [: -lt: unary operator expected
Warning: ynh_mongo_db: line 96: mongo: command not found
Warning: ynh_mongo_db: line 96: mongo: command not found
Info: [###+................] > Removing app main directory...
Warning: ynh_secure_remove called with empty argument, ignoring.
Info: [####+...............] > Removing NGINX web server configuration...
Info: '/etc/nginx/conf.d/latex.ynh.fr.d/overleaf.conf' wasn't deleted because it doesn't exist.
Info: [#####+..............] > Removing dependencies...
Info: [######+.............] > Removing various files...
Info: '/var/log/overleaf' wasn't deleted because it doesn't exist.
Info: [#######+............] > Removing the dedicated system user...
Info: [########+...........] > Removal of overleaf completed
Error: The operation 'Install the 'overleaf' app' could not be completed. Please share the full log of this operation using the command 'yunohost log share 20230822-060227-app_install-overleaf' to get help